Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M12
(247 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 50 3e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 44 1e-05
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 44 1e-05
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 38 7e-04
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.062
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 1.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 1.3
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 27 1.3
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 27 1.3
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 27 2.3
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 27 2.3
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 26 4.1
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 26 4.1
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 26 4.1
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 26 4.1
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 26 4.1
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr... 25 7.1
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 25 7.1
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr... 25 9.4
U13019-10|AAC24442.1| 757|Caenorhabditis elegans Hypothetical p... 25 9.4
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 25 9.4
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 49.6 bits (113), Expect = 3e-07
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 105 PSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTC 242
P C C +RPVCG+D TY+N C L C + +T+ DL GTC
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC 60
Score = 31.5 bits (68), Expect = 0.082
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 111 SCACARNLRPVCGSDGKTYHNQCLLYCE-RDKTHSDLKIVKEGTC 242
S C + P+CG++G T+ N C L E + +S +++ G C
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC 813
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTC 242
C + P+C SD TY N C + ++ S+L+++ +G C
Sbjct: 590 CTDDKHPICASDFSTYENLC-QFRKQKCLDSELEVLFKGKC 629
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 117 ACARNLRPVCGSDGKTYHNQCLL 185
AC + PVC S+G+ N+C L
Sbjct: 871 ACPKEYSPVCASNGQNIVNECEL 893
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +3
Query: 117 ACARNLRPVCGSDGKTYHNQCLLY---CERDKTHSD---LKIVKEGTC 242
+C + +PVC S G+T+ + C + C DK H+ L + +G C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC 1119
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHSD-LKIVKEGTC 242
C + PVC S G T+ N C + C ++T D L I K C
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVC 862
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQC 179
C+R+++PVC T+ N C
Sbjct: 375 CSRDVKPVCDEANNTHQNLC 394
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +3
Query: 138 PVCGSDGKTYHNQCLL---YC-ERDKTHSDLKIVKEGTC 242
PVC ++G T+ N CL+ C + K +++ +G C
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQC 969
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 138 PVCGSDGKTYHNQCLLYCER 197
PVC ++G Y N C+ R
Sbjct: 126 PVCDTNGSVYRNLCVFQMRR 145
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 44.4 bits (100), Expect = 1e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
C N VCG+DGKTY N+C L K D+ + K G C+
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 39.9 bits (89), Expect = 2e-04
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTC 242
C +RPVC ++G+T+ N+C + + +T S +K+ +GTC
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 117 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
+C + VCGSDGKTY N+C L ++ + CE
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 31.5 bits (68), Expect = 0.082
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 111 SCACARNLRPVCGSDGKTYHNQCLL 185
+C + N P+CGSDG Y+NQC L
Sbjct: 685 TCNLSSNY-PICGSDGIVYNNQCHL 708
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 141 VCGSDGKTYHNQCLL 185
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 135 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCE 245
+ VCG+DG TY ++C + ++ H ++ EG C+
Sbjct: 549 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCD 585
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 44.4 bits (100), Expect = 1e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
C N VCG+DGKTY N+C L K D+ + K G C+
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 39.9 bits (89), Expect = 2e-04
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 120 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTC 242
C +RPVC ++G+T+ N+C + + +T S +K+ +GTC
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 117 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
+C + VCGSDGKTY N+C L ++ + CE
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 32.3 bits (70), Expect = 0.047
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 141 VCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
VCGSDG TY N C L K D+ V G C+
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICD 853
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 135 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCE 245
+ VCG+DG TY ++C + ++ H ++ EG C+
Sbjct: 557 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCD 593
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 38.3 bits (85), Expect = 7e-04
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 108 SSCACARNLRPVCGSDGK---TYHNQCLLYCERDKTHSDLKIVKEGTC 242
S+C+C + PVC +G TY N+C+ C ++ DL ++ EG+C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQE-NKKDLVLLYEGSC 69
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.062
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 108 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
S C+C +L PVC +DG Y + C C ++ +CE
Sbjct: 526 SQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 83 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE 220
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E
Sbjct: 566 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYE 607
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 83 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE 220
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E
Sbjct: 788 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYE 829
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 126 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTC 242
+ + P C ++G H+QC+ CER D T H+ + +G C
Sbjct: 380 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKC 422
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 126 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTC 242
+ + P C ++G H+QC+ CER D T H+ + +G C
Sbjct: 377 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKC 419
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 123 ARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
AR++ CG GK + QC+L + + + + ++G CE
Sbjct: 89 ARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCE 129
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 153 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 236
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 153 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 236
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 108 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 245
S C+C L PVC G Y + C C + ++ +C+
Sbjct: 534 SQCSCENARLYPVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 210 CASCPSRNTRGTGCGKSC 157
CAS S T G GC KSC
Sbjct: 147 CASSCSVGTWGLGCSKSC 164
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 210 CASCPSRNTRGTGCGKSC 157
CAS S T G GC KSC
Sbjct: 147 CASSCSVGTWGLGCSKSC 164
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 210 CASCPSRNTRGTGCGKSC 157
CAS S T G GC KSC
Sbjct: 147 CASSCSVGTWGLGCSKSC 164
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 210 CASCPSRNTRGTGCGKSC 157
CAS S T G GC KSC
Sbjct: 147 CASSCSVGTWGLGCSKSC 164
>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical protein
C14C10.4 protein.
Length = 1058
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 44 NEYTRYISDRRCANIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQR 214
NE Y+ ++ N+R N A V+ K + I R DLP + + + E + R
Sbjct: 845 NELAGYL--KKSFNLRENDARRVVLQAKTDQLNQLIERNDLPGALRMAVEETNASNR 899
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/35 (28%), Positives = 13/35 (37%)
Frame = +3
Query: 63 FLIXXXXXXXXXXLPSSCACARNLRPVCGSDGKTY 167
FL+ SC CA ++P C TY
Sbjct: 14 FLLIEATATSTREKRQSCGCAPRVQPSCSCQQTTY 48
>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
protein D2021.1 protein.
Length = 1168
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 170 QPVPLVLREGQDAQRFENRERGY 238
QP+PL LR QDA + +RE Y
Sbjct: 456 QPIPLELRNRQDA-AYADREAQY 477
>U13019-10|AAC24442.1| 757|Caenorhabditis elegans Hypothetical
protein T12A2.2 protein.
Length = 757
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 247 SSHVPSFTIFKSLCVLSLSQYKRH 176
S H+P+F +F L +++L Y R+
Sbjct: 267 SEHMPAFGVFGLLQIVALMHYARN 290
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 111 SCACARNLRPVCGSDGKTYHNQ 176
SC CA ++P C TY Q
Sbjct: 47 SCGCAPRVQPSCSCQRTTYTTQ 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,404,193
Number of Sequences: 27780
Number of extensions: 90072
Number of successful extensions: 339
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 61
effective length of database: 11,045,618
effective search space used: 220912360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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