Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M11
         (332 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038933-1|AAH38933.1|  200|Homo sapiens transmembrane protein 1...    28   6.0  
BC017574-1|AAH17574.1|  110|Homo sapiens TMEM126B protein protein.     28   6.0  
BC012065-1|AAH12065.1|  200|Homo sapiens transmembrane protein 1...    28   6.0  
AF220193-1|AAF67658.1|  219|Homo sapiens uncharacterized hypotha...    28   6.0  

>BC038933-1|AAH38933.1|  200|Homo sapiens transmembrane protein 126B
           protein.
          Length = 200

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 149 LRKKLKNVLFEMTTFGFYTGL*SVWARIYRFTHCFQGKFRHRLLQRF 289
           LRK++   +++M TFG   G   +++  + F  CF  K +H  L+ +
Sbjct: 34  LRKEMTQNIYQMATFGTTAGFSGIFSN-FLFRRCF--KVKHDALKTY 77


>BC017574-1|AAH17574.1|  110|Homo sapiens TMEM126B protein protein.
          Length = 110

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 149 LRKKLKNVLFEMTTFGFYTGL*SVWARIYRFTHCFQGKFRHRLLQRF 289
           LRK++   +++M TFG   G   +++  + F  CF  K +H  L+ +
Sbjct: 34  LRKEMTQNIYQMATFGTTAGFSGIFSN-FLFRRCF--KVKHDALKTY 77


>BC012065-1|AAH12065.1|  200|Homo sapiens transmembrane protein 126B
           protein.
          Length = 200

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 149 LRKKLKNVLFEMTTFGFYTGL*SVWARIYRFTHCFQGKFRHRLLQRF 289
           LRK++   +++M TFG   G   +++  + F  CF  K +H  L+ +
Sbjct: 34  LRKEMTQNIYQMATFGTTAGFSGIFSN-FLFRRCF--KVKHDALKTY 77


>AF220193-1|AAF67658.1|  219|Homo sapiens uncharacterized
           hypothalamus protein HT007 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 149 LRKKLKNVLFEMTTFGFYTGL*SVWARIYRFTHCFQGKFRHRLLQRF 289
           LRK++   +++M TFG   G   +++  + F  CF  K +H  L+ +
Sbjct: 53  LRKEMTQNIYQMATFGTTAGFSGIFSN-FLFRRCF--KVKHDALKTY 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,663,269
Number of Sequences: 237096
Number of extensions: 754500
Number of successful extensions: 1552
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)