Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M11
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X01005-1|CAA25498.1|  273|Caenorhabditis elegans protein ( Caeno...    30   0.46 
U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical pr...    30   0.46 
AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical ...    30   0.46 
AF067947-2|AAC19229.2|  273|Caenorhabditis elegans Hypothetical ...    30   0.46 
AF067947-1|AAC19233.1|  273|Caenorhabditis elegans Hypothetical ...    30   0.46 
AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical ...    30   0.46 
U39743-1|AAA80436.2|  314|Caenorhabditis elegans Hypothetical pr...    29   0.61 
AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical ...    28   1.9  
Z83238-5|CAB05796.1|  304|Caenorhabditis elegans Hypothetical pr...    27   3.3  
U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical pr...    26   7.5  
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p...    26   7.5  
Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical pr...    25   10.0 

>X01005-1|CAA25498.1|  273|Caenorhabditis elegans protein (
           Caenorhabditis eleganstransposable element Tc1. ).
          Length = 273

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268


>U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical
           protein F18C5.7 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338


>AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical
           protein Y39F10A.4 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338


>AF067947-2|AAC19229.2|  273|Caenorhabditis elegans Hypothetical
           protein T10B5.9 protein.
          Length = 273

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268


>AF067947-1|AAC19233.1|  273|Caenorhabditis elegans Hypothetical
           protein T10B5.1 protein.
          Length = 273

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268


>AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical
           protein T07D3.8 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338


>U39743-1|AAA80436.2|  314|Caenorhabditis elegans Hypothetical
           protein R173.2 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 283 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 188
           LE A    P+  + K IDS P R +A I A G
Sbjct: 278 LENAWKAIPMSVIHKLIDSMPRRCQAFIDANG 309


>AF098501-8|AAC67403.1|  459|Caenorhabditis elegans Hypothetical
           protein H28G03.4 protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 298 SLKKSLEQAVAKFPLETVRKSIDSCPNRLKA 206
           SLK SL++A  +  +  +R ++DS P RL+A
Sbjct: 369 SLKDSLKKAWDELDINYLRATVDSFPRRLEA 399



 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 247 VRKSIDSCPNRLKACIKAKGGHFE 176
           +R ++D+ P R++ CI+A G  FE
Sbjct: 425 LRATVDAFPKRVRVCIEADGDIFE 448


>Z83238-5|CAB05796.1|  304|Caenorhabditis elegans Hypothetical
           protein T08G3.6 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 137 YVGIKFNNVSLLH*KKCIFICNR 69
           YVGIK +N    H KK    C+R
Sbjct: 260 YVGIKISNCEAAHEKKIFLYCDR 282


>U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical
           protein F47G3.1 protein.
          Length = 886

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 192 LAFIQAFNLFGHESIDLRTVSKGNFATACSKDFLR 296
           L++  + N+FG ESI L+++   N   A    F R
Sbjct: 303 LSYYPSVNIFGSESIMLKSLVLNNSCNALRPQFAR 337


>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
            protein C56C10.12 protein.
          Length = 1599

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 72   QNLWLD*VNIPYY 34
            +N+WLD VN+PY+
Sbjct: 1283 KNMWLDFVNMPYF 1295


>Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical
           protein F26E4.5 protein.
          Length = 474

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 215 IKGLY--KSQRWSFRIERFLIFS*DFNKYVGIK 123
           +KG+Y  KS  WSF +  F +FS ++  Y  +K
Sbjct: 369 LKGIYSSKSDVWSFGVVMFEVFSGEY-PYADVK 400


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,053,904
Number of Sequences: 27780
Number of extensions: 124060
Number of successful extensions: 246
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)