Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M09
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.3  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 36  VATQPKIHKPAIKIPVNPQKPQVFVKAQPQ 125
           ++T+PKI + AI   +   KP +   A P+
Sbjct: 64  LSTKPKIMQGAISNHIQGSKPNILSSAFPR 93


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 170 RLRVQYLYVGDFHGFLRLGLNEYLGFLGIYGDF 72
           R+  Q+  +G    + R+ +   L  LG++G+F
Sbjct: 105 RIDKQFGLLGYSINYRRISIFVNLAILGVFGEF 137


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 194 RACSAAKASDTGSAYGRES 250
           R C     S +GS YGR S
Sbjct: 64  RKCLLVGMSKSGSRYGRRS 82


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 159 SVLVCW*LSRVFAVGP*RILGVFGDLRGFLWPVYGF*VGSLREL 28
           S+  C+ +++ FA+ P  I      L   L+PV  F + ++ E+
Sbjct: 5   SIKTCFYVAKFFAITPSSIYDKPTKLYQKLYPVLMFLIYTITEI 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,087
Number of Sequences: 336
Number of extensions: 2494
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)