Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M09
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical ...    29   1.4  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical ...    28   4.4  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z68105-5|CAA92123.2|  729|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL009066-1|CAA15625.2|  729|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -3

Query: 224 YHSPLRRYRLDGFRI-HFGRLRVQYLYVG-DFHGFLRLGLNEYLGFLGIYGDFYGRFMD 54
           YH P   YR D  ++  F R   +YL     F   LR+  +  L   G YG+F+ R  D
Sbjct: 614 YHFPNYNYRNDIHQVKRFERTLTRYLTRKLGFEAVLRIRTSRGLALTGFYGNFFVRSPD 672


>AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical
           protein Y34B4A.8 protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 23/101 (22%), Positives = 41/101 (40%)
 Frame = +3

Query: 3   NRKRRPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVY 182
           NR   PS     A  PK    +  I V  +  +    +QP K + V+   ++        
Sbjct: 507 NRPPPPSFRAACADTPKSRPISYNIAVGARPNESHSVSQPPKGMTVSMEDIIAEA----- 561

Query: 183 SKPVEPVAPQRRVIRVAPMAGNPRSILLPVTIKDMKDLKSI 305
                PVAP+R+ + +  + G PR +  P      +D+ ++
Sbjct: 562 -----PVAPERKRLSILSLTGPPRVVPTPTQPSTSQDVATV 597


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +3

Query: 42  TQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVYSKPVEPVAPQ 212
           T+P   KP   +PVNP      V   P  P K    + +N +  +   KP   V P+
Sbjct: 816 TKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAET-EKPKTEVTPK 871


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +3

Query: 63  PAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVYSKPVEPVAPQRRVIRVAPMA 242
           PA K P    K    +   P++ +  T ++ +N++     + PVE    +R+ + VAP A
Sbjct: 336 PAPKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPA 395


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +3

Query: 63  PAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVYSKPVEPVAPQRRVIRVAPMA 242
           PA K P    K    +   P++ +  T ++ +N++     + PVE    +R+ + VAP A
Sbjct: 404 PAPKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPA 463


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282  DMKDLKSIKIINAADLKNASNMRLAA-ANLLSQSTLHDLKAETRNEYEYEHN 434
            D +++K+++I+    +    N+R    AN +S   L   K+  RN YE+E +
Sbjct: 1545 DPEEIKNVEIVMELLVLTTQNLRPTMDANEISTRLLGMAKSRVRNPYEFERH 1596


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282  DMKDLKSIKIINAADLKNASNMRLAA-ANLLSQSTLHDLKAETRNEYEYEHN 434
            D +++K+++I+    +    N+R    AN +S   L   K+  RN YE+E +
Sbjct: 1545 DPEEIKNVEIVMELLVLTTQNLRPTMDANEISTRLLGMAKSRVRNPYEFERH 1596


>Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical
           protein ZK1098.2 protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +3

Query: 117 QPQKPVK-VTNIQV-LNSQTTKVYSKPVEPVAPQRRVIRVAPMAGNPRSILLPVTIKDMK 290
           QP++ ++ V  +   L +Q  ++Y K V+P  P+  +  VA MA    +    +T+ D+ 
Sbjct: 438 QPEQQIQNVAGVMFELYAQLDRIYIKAVDPKQPKECLAAVAKMAKLSIAHYTKITVTDVH 497

Query: 291 DLKSIKIINAADLKN 335
            + +    ++ +LKN
Sbjct: 498 LICAFLSPDSKNLKN 512


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 57  HKPAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVYSKPV-EPVAPQRRVIRVA 233
           ++P  +    PQ+PQ F   Q Q+PV+    Q       +   +P   P+  Q  VI  A
Sbjct: 72  YQPQFQAQQQPQQPQYFQPQQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQA 131

Query: 234 P 236
           P
Sbjct: 132 P 132


>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical
           protein ZC376.6 protein.
          Length = 1152

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 276 IKDMKDLKSIKIINAADLKNASNMRLAAANLLSQSTLHDLKAETRNEYE 422
           I  +KD+K+IKII     +++  M+LA+  ++    +  L + T   +E
Sbjct: 773 INKLKDIKNIKIILEVINRSSVRMQLASLPIIIDIFMESLNSSTPQGFE 821


>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical protein
            F52H3.7a protein.
          Length = 1245

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +3

Query: 18   PSTTTHVATQPKIHKPAIK---IPVNPQKPQVFVKAQPQKPVKVTNIQVLNSQTTKVYSK 188
            PS+  H +++P+I +  ++   +      P+   +  P+KP K+  +   ++      SK
Sbjct: 922  PSSEEHNSSEPEIVEDVVEKQIVAAVASAPETQPEESPKKPRKLAEMAHESAFPVPYRSK 981

Query: 189  PVEPVAPQRRVI 224
             VEP  P + +I
Sbjct: 982  LVEPFEPGQTLI 993


>AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical
           protein ZK484.3 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
 Frame = +3

Query: 21  STTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTNIQVL--NSQTTKVYSKPV 194
           +TTT   T   I K        P K  V  KA  +KP   TN+     +S       K  
Sbjct: 197 ATTTPTTTNATIVKKEETKAEQPVKKVVKKKAISKKPPTTTNVTSTSDSSAAAAAAKKKK 256

Query: 195 EPVAPQRRVIRVAPMAGNPRSILL----PVTIKDMKDL-KSIKIINAADLKNA-SNMRLA 356
           +PV P+           N + + L      T K+ K L K I  I    LK A  N +++
Sbjct: 257 KPVVPKLSTKPTKQYLENEKQMRLMATQKCTYKEPKSLEKRIYFIPFYSLKLAKKNDQIS 316

Query: 357 AANLLS 374
             NL+S
Sbjct: 317 YLNLIS 322


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 15  RPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTN 146
           RP+TTT  AT+P   +PA+     P+       A P +P    N
Sbjct: 244 RPATTTGTATRPT--RPAVPAASAPRALTSRAPAGPSRPTTTRN 285


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 15  RPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTN 146
           RP+TTT  AT+P   +PA+     P+       A P +P    N
Sbjct: 244 RPATTTGTATRPT--RPAVPAASAPRALTSRAPAGPSRPTTTRN 285


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 15  RPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQKPVKVTN 146
           RP+TTT  AT+P   +PA+     P+       A P +P    N
Sbjct: 244 RPATTTGTATRPT--RPAVPAASAPRALTSRAPAGPSRPTTTRN 285


>Z68105-5|CAA92123.2|  729|Caenorhabditis elegans Hypothetical
           protein F13E6.2 protein.
          Length = 729

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 3   NRKRRPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQK 128
           N+  RPST    ATQP+I   AI+        +  +  +P +
Sbjct: 85  NQAARPSTNQQTATQPQITTNAIEDTQESNSAEPEISREPSR 126


>AL009066-1|CAA15625.2|  729|Caenorhabditis elegans Hypothetical
           protein F13E6.2 protein.
          Length = 729

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 3   NRKRRPSTTTHVATQPKIHKPAIKIPVNPQKPQVFVKAQPQK 128
           N+  RPST    ATQP+I   AI+        +  +  +P +
Sbjct: 85  NQAARPSTNQQTATQPQITTNAIEDTQESNSAEPEISREPSR 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,935,415
Number of Sequences: 27780
Number of extensions: 237705
Number of successful extensions: 854
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)