Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M09
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   1.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.4  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   3.2  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   4.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   5.5  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   7.3  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 474 HSCHYLNRHSYSHCYVHTRIHSESPL 397
           + C  +N H    C    RI+S+SPL
Sbjct: 34  NQCQAVNGHCSHLCLPAPRINSKSPL 59


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 474 HSCHYLNRHSYSHCYVHTRIHSESPL 397
           + C  +N H    C    RI+S+SPL
Sbjct: 34  NQCQAVNGHCSHLCLPAPRINSKSPL 59


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 369 LSQSTLHDLKAETRNEYEYEHNSGNN 446
           LS  T+H+      N Y   +N+ NN
Sbjct: 318 LSNKTIHNNNNYNNNNYNNNYNNYNN 343


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 492 LDHRHRHSCHYLNRHSYS 439
           L HR RHS  +L+  +YS
Sbjct: 191 LGHRQRHSTIHLSTGNYS 208


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 137 FHGFLRLGLNEYLGFLGIYGDF 72
           F GF+ LG    +GF G+   F
Sbjct: 88  FKGFVHLGAGLAVGFSGLAAGF 109


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 18  PSTTTHVATQPKI 56
           PST++H+  QP I
Sbjct: 443 PSTSSHILQQPSI 455


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 322 AALIILIDFKSFMSLIVTGKSIERGFPAIG 233
           ++LIILI +   +  I+   S E  F AIG
Sbjct: 22  SSLIILISYALILFNILHMSSAEGWFKAIG 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,471
Number of Sequences: 438
Number of extensions: 2896
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)