Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M07
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 30 0.72
U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 28 2.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 5.1
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 5.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 5.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 27 5.1
U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical ... 27 8.9
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 8.9
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 293 QCQSIRHYNPAKYSSSSELQHCRCRSGLHVQGQDWC 400
QCQ + N AKY Q+C+ + H Q WC
Sbjct: 25 QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59
>U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical
protein C14E2.5 protein.
Length = 147
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +3
Query: 210 TKTHIPGFGDKMTAAGKVNLFHNDNHDFSAKAFATTTLPNIPQVPNFNTVGAGVDYMFKD 389
T IP F + A K LF +N D + +T N + NF + + Y +D
Sbjct: 10 TAMEIPTFARALNAEPKSQLFLKENQDSQPRLLVSTAEKNGSVISNFKS--SWNHYYIED 67
Query: 390 KIGASATAVHTDVFN 434
+ T VF+
Sbjct: 68 NSSSDENISQTTVFD 82
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 32 CTNCQLRRHLRCYGQGTYNWKRKSQAQC 115
CT CQ HL+C G + W SQ QC
Sbjct: 256 CTKCQKWVHLKCTGIRSKQW--NSQFQC 281
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 259 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 293
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 550 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 584
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 565 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 599
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 565 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 599
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 259 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 293
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 550 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 584
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 565 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 599
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 468 RFSFPPESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 358
RFS P SSH++ H E+ S+ +QS + SPL ++
Sbjct: 565 RFSQPSTSSHHETSHSPEKDSEAYQSR--SFSPLNYQ 599
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 132 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 233
L +MK+ A A +AY DNVNG L++ PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215
>U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical
protein C03G6.6 protein.
Length = 307
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 416 NGGRRCTNLVLEHVVHSGTDSVEVRNLRNIWQGCSGECFGTEIVVVVMEEIYFTGS 249
N G T+ + VV+ D + V N+ N+W GE F + + E F S
Sbjct: 188 NSGYIDTDKIHIDVVYFFKDLLNVTNIDNLWFDAEGEEFANDFFDIFYENGKFVQS 243
>AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical
protein T23F4.1 protein.
Length = 261
Score = 26.6 bits (56), Expect = 8.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 83 YNWKRKSQAQCPW 121
Y WKRKS+++C W
Sbjct: 91 YLWKRKSRSRCEW 103
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 328 IFLKFRTSTLSVPEWTTCSRTR--LVHLRPPFTPMSLIVMTTLWGET 462
I +K + TL V W+T S L L PP +P SL+V+ G+T
Sbjct: 187 IAVKTKDGTLCV--WSTSSEPSCPLPSLPPPDSPSSLVVLPAAAGKT 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,912,822
Number of Sequences: 27780
Number of extensions: 257016
Number of successful extensions: 637
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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