Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M07
         (469 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.40 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   3.8  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   5.0  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   5.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 281 QPRFQCQSIRHYNPAKYSSSSELQHCR 361
           QP F+C+  + +   +Y S+  L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +1

Query: 301  KHSPLQPCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPFTPMSLIVMTTLWGETES 468
            K +P+  CQ       + +++      S + LV  RPP  P  +I   T++ + ++
Sbjct: 1167 KSAPIH-CQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKADN 1221


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/45 (22%), Positives = 18/45 (40%)
 Frame = +3

Query: 264 NLFHNDNHDFSAKAFATTTLPNIPQVPNFNTVGAGVDYMFKDKIG 398
           +L  N+N DF      +   P++   P  ++   G      D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 303 AFATTTLPNIPQ 338
           AFA   LPN+PQ
Sbjct: 17  AFAYVPLPNVPQ 28


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 303 AFATTTLPNIPQ 338
           AFA   LPN+PQ
Sbjct: 3   AFAYVPLPNVPQ 14


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 217 VFVRVAPCPFTLS*ANPA 164
           +FV V PCP+     N A
Sbjct: 228 IFVPVKPCPWICELTNDA 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,847
Number of Sequences: 438
Number of extensions: 3239
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)