Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M05
(406 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 55 8e-08
BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein. 55 8e-08
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 55 8e-08
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 55 8e-08
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 55 8e-08
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 55 8e-08
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 54 2e-07
BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin t... 47 2e-05
BC063620-1|AAH63620.1| 488|Homo sapiens AGRN protein protein. 47 2e-05
BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin t... 47 2e-05
BC007649-1|AAH07649.1| 488|Homo sapiens AGRN protein protein. 47 2e-05
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 47 2e-05
AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens ... 47 2e-05
AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens ... 47 2e-05
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 47 2e-05
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 47 2e-05
BC034009-1|AAH34009.1| 181|Homo sapiens AGRN protein protein. 41 0.002
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 40 0.003
BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin t... 37 0.022
AL050329-2|CAB99359.1| 399|Homo sapiens protein ( Human DNA seq... 37 0.022
BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin t... 36 0.052
AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens ... 36 0.052
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 36 0.068
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 36 0.068
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 36 0.068
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 36 0.068
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 36 0.068
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 36 0.068
BC039143-1|AAH39143.1| 740|Homo sapiens FAT2 protein protein. 34 0.16
AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 pro... 34 0.16
AB177851-1|BAD66829.1| 573|Homo sapiens KIAA0811 splice variant... 34 0.16
AB011535-1|BAA32463.1| 573|Homo sapiens MEGF1 protein. 34 0.16
AL645608-14|CAI15576.1| 270|Homo sapiens agrin protein. 34 0.21
BC004220-1|AAH04220.2| 116|Homo sapiens AGRN protein protein. 33 0.36
EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein. 33 0.48
BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein. 33 0.48
AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein. 33 0.48
AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protei... 33 0.48
AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein. 33 0.48
U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6 prot... 32 0.84
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 30 2.6
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 30 2.6
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 30 2.6
X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein. 30 2.6
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 30 2.6
BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein. 30 2.6
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 30 2.6
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 30 2.6
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 30 2.6
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant... 30 2.6
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein. 30 2.6
BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated pr... 30 3.4
BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated pr... 30 3.4
AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens ... 30 3.4
AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated pr... 30 3.4
AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecu... 30 3.4
AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein. 30 3.4
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein. 29 5.9
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein. 29 5.9
AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens ... 29 7.8
AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein. 29 7.8
AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein. 29 7.8
AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein. 29 7.8
AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein. 29 7.8
AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein. 29 7.8
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 3982 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 4039
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 4040 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 4099
Query: 362 QEC 370
+C
Sbjct: 4100 GQC 4102
>BC109204-1|AAI09205.1| 351|Homo sapiens HSPG2 protein protein.
Length = 351
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 217 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 274
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 275 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 334
Query: 362 QEC 370
+C
Sbjct: 335 GQC 337
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 3982 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 4039
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 4040 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 4099
Query: 362 QEC 370
+C
Sbjct: 4100 GQC 4102
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 3982 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 4039
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 4040 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 4099
Query: 362 QEC 370
+C
Sbjct: 4100 GQC 4102
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 3961 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 4018
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 4019 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 4078
Query: 362 QEC 370
+C
Sbjct: 4079 GQC 4081
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 55.2 bits (127), Expect = 8e-08
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL S + L W V R SL++N +
Sbjct: 1922 LAMVGGHLEFRYELG--SGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 1979
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 1980 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 2039
Query: 362 QEC 370
+C
Sbjct: 2040 GQC 2042
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 54.0 bits (124), Expect = 2e-07
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ G LEFRY+LG + VL + + L W V R SL++N +
Sbjct: 3984 LAMVGGHLEFRYELG--SGLAVLRTAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSS 4041
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
+++GGV+ S+ L+ T ++ F GC+ +V + +D+ S + S +
Sbjct: 4042 PGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGI 4101
Query: 362 QEC 370
+C
Sbjct: 4102 GQC 4104
>BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 1009
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/120 (22%), Positives = 53/120 (44%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXX 196
G +EFR+D G VL S L W ++ ++R + L+++ E
Sbjct: 669 GHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFT 726
Query: 197 XXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+F+GGV + + N+GV FSG I+ +++ + + + + NV+ ++
Sbjct: 727 QIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAH 786
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ L+FR++ G ++ S + W V + R G + L++N
Sbjct: 440 LAIIRRSLQFRFNCG--TGVAIIVSETKIKLGGWHMVMLYRDGLNGLLQLNNGTPVTGQS 497
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDI----VNSSIQ 349
P+++GG + L TG GF GC++ + + +D+ + ++
Sbjct: 498 QGQYSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALS 557
Query: 350 SANVQECSN 376
A+V ECS+
Sbjct: 558 GADVGECSS 566
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 886 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 943
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 944 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 1002
Query: 359 VQEC 370
+ C
Sbjct: 1003 INTC 1006
>BC063620-1|AAH63620.1| 488|Homo sapiens AGRN protein protein.
Length = 488
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+R+ +LEFRYDLG V+ S + + WT V + R G +L++
Sbjct: 136 LALRDRRLEFRYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 193
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 194 PVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 236
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 364 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 421
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 422 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 481
Query: 359 VQEC 370
++ C
Sbjct: 482 LRPC 485
>BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 375
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/120 (22%), Positives = 53/120 (44%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXX 196
G +EFR+D G VL S L W ++ ++R + L+++ E
Sbjct: 35 GHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFT 92
Query: 197 XXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+F+GGV + + N+GV FSG I+ +++ + + + + NV+ ++
Sbjct: 93 QIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAH 152
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 252 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 309
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 310 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 368
Query: 359 VQEC 370
+ C
Sbjct: 369 INTC 372
>BC007649-1|AAH07649.1| 488|Homo sapiens AGRN protein protein.
Length = 488
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+R+ +LEFRYDLG V+ S + + WT V + R G +L++
Sbjct: 136 LALRDRRLEFRYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 193
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 194 PVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 236
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 364 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 421
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 422 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 481
Query: 359 VQEC 370
++ C
Sbjct: 482 LRPC 485
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+R+ +LEFRYDLG V+ S + + WT V + R G +L++
Sbjct: 1693 LALRDRRLEFRYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 1750
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 1751 PVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 1793
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 1921 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 1978
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 1979 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 2038
Query: 359 VQEC 370
++ C
Sbjct: 2039 LRPC 2042
>AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ40230 fis, clone TESTI2022960, weakly similar to
Drosophila melanogaster SP2353 mRNA. ).
Length = 775
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/120 (22%), Positives = 53/120 (44%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXX 196
G +EFR+D G VL S L W ++ ++R + L+++ E
Sbjct: 435 GHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFT 492
Query: 197 XXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+F+GGV + + N+GV FSG I+ +++ + + + + NV+ ++
Sbjct: 493 QIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAH 552
Score = 45.2 bits (102), Expect = 8e-05
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ L+FR++ G ++ S + W V + R G + L++N
Sbjct: 206 LAIIRRSLQFRFNCG--TGVAIIVSETKIKLGGWHTVMLYRDGLNGLLQLNNGTPVTGQS 263
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDI----VNSSIQ 349
P+++GG + L TG GF GC++ + + +D+ + ++
Sbjct: 264 QGQYSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALS 323
Query: 350 SANVQECSN 376
A+V ECS+
Sbjct: 324 GADVGECSS 332
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 652 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 709
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 710 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 768
Query: 359 VQEC 370
+ C
Sbjct: 769 INTC 772
>AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ35160 fis, clone PLACE6011334, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 463
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/120 (22%), Positives = 53/120 (44%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXX 196
G +EFR+D G VL S L W ++ ++R + L+++ E
Sbjct: 123 GHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFT 180
Query: 197 XXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+F+GGV + + N+GV FSG I+ +++ + + + + NV+ ++
Sbjct: 181 QIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAH 240
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 340 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 397
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 398 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 456
Query: 359 VQEC 370
+ C
Sbjct: 457 INTC 460
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+R+ +LEFRYDLG V+ S + + WT V + R G +L++
Sbjct: 1674 LALRDRRLEFRYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 1731
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 1732 PVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 1774
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 1902 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 1959
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 1960 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 2019
Query: 359 VQEC 370
++ C
Sbjct: 2020 LRPC 2023
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/103 (30%), Positives = 46/103 (44%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+R+ +LEFRYDLG V+ S + + WT V + R G +L++
Sbjct: 1693 LALRDRRLEFRYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 1750
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 1751 PVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 1793
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 1921 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 1978
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 1979 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 2038
Query: 359 VQEC 370
++ C
Sbjct: 2039 LRPC 2042
>BC034009-1|AAH34009.1| 181|Homo sapiens AGRN protein protein.
Length = 181
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
LA+ +G L+ Y+LG + PVVL S + N W V R SL++
Sbjct: 57 LAIVDGHLQLSYNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSS 114
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSAN 358
+++GG+ + V G GF GC++DV++ + + ++ ++
Sbjct: 115 PLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPE 174
Query: 359 VQEC 370
++ C
Sbjct: 175 LRPC 178
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+R G++ F +DLG + + + + N W +H+ARFG+ SL + + S ++
Sbjct: 2171 MRRGRVAFLWDLGSGSTRLEFP-DFPIDDNRWHSIHVARFGNIGSLSVKEMSSNQKSPTK 2229
Query: 188 XXXX--------XXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSS 343
MFVGG+ I + VT F GC+ + + ++ + N
Sbjct: 2230 TSKSPGTANVLDVNNSTLMFVGGLGGQIKKSPAVKVT-HFKGCLGEAFLNGKSIGLWNYI 2288
Query: 344 IQSANVQECSNNDRGDIP 397
+ + C + + + P
Sbjct: 2289 EREGKCRGCFGSSQNEDP 2306
>BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 37.1 bits (82), Expect = 0.022
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 29 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 86
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V S+ N
Sbjct: 87 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDSVDGKN 145
Query: 359 VQEC 370
+ C
Sbjct: 146 INTC 149
>AL050329-2|CAB99359.1| 399|Homo sapiens protein ( Human DNA
sequence from clone RP1-22I17 on chromosome 6q11.1-12
Contains the 3' end of the PHF3 gene for PHD finger
protein 3. ).
Length = 399
Score = 37.1 bits (82), Expect = 0.022
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+++ N ++ RY+LG + T+ + W + R G L ++ ++ E+
Sbjct: 5 ISLVNSSVQLRYNLGDRTIILETLQKVTINGSTWHIIKAGRVGAEGYLDLDGINVTEK-A 63
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTG---GFSGCIKDVMIYENAVDIVNSSIQ- 349
++GGV S+ L N + GF GCI+ V+I + + +
Sbjct: 64 STKMSSLDTNTDFYIGGVS-SLNLVNPMAIENEPVGFQGCIRQVIINNQELQLTEFGAKG 122
Query: 350 SANVQECSNNDRG 388
+NV +C G
Sbjct: 123 GSNVGDCDGTACG 135
>BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 29 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 86
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 87 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 145
Query: 359 VQEC 370
+ C
Sbjct: 146 INTC 149
>AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ35675 fis, clone SPLEN2018302, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 152
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L +R+G L F Y+LG +++ N + W V R G S + ++ +
Sbjct: 29 LGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKS 86
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKD-VMIYENAVDIVNSSIQSAN 358
++VGG+ + I L+ N G GCI + + + +V ++ N
Sbjct: 87 PGMMRQLNINGALYVGGMKE-IALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKN 145
Query: 359 VQEC 370
+ C
Sbjct: 146 INTC 149
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 35.5 bits (78), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ +++G L FR + V L + +W V I + G +S +N + +
Sbjct: 1767 MELKSGILTFRLNTSLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHAS-- 1824
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLN-NNTGVTGGFSGCIKDVMIYENAV---DIVNSSIQ 349
P++VGG+ ++ + + + GF GC+KDV AV V+S
Sbjct: 1825 ESGDQPLVVNSPVYVGGIPQELLNSYQHLCLEQGFGGCMKDVKFTRGAVVNLASVSSGAV 1884
Query: 350 SANVQECSNND 382
N+ C + D
Sbjct: 1885 RVNLDGCLSTD 1895
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSN--KTLPANEWTDVHIARFGHSVSLKINLVHSYEQ 175
L ++ G+L F +D G V T++ K +W ++ R + ++ +++
Sbjct: 1572 LQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSS 1631
Query: 176 WXXXXXXXXXXXXPMFVGGVDDS--IVLNNNTGVTGGFSGCIKDVMIYEN 319
+F+GG+ S I+ + + GF GC+KDV +N
Sbjct: 1632 AILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKN 1681
>BC039143-1|AAH39143.1| 740|Homo sapiens FAT2 protein protein.
Length = 740
Score = 34.3 bits (75), Expect = 0.16
Identities = 19/89 (21%), Positives = 45/89 (50%)
Frame = +2
Query: 68 LTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGGVDDSI 247
L+S + + +EW + + S+ L ++ + + + +GG+ I
Sbjct: 232 LSSQRHVNDHEWHSILVEEMDASIRLMVDSMGNTSLVVPENCRGLRPERHLLLGGL---I 288
Query: 248 VLNNNTGVTGGFSGCIKDVMIYENAVDIV 334
+L++++ V+ GF GC+ V++ E A+D++
Sbjct: 289 LLHSSSNVSQGFEGCLDAVVVNEEALDLL 317
>AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 protein.
Length = 4349
Score = 34.3 bits (75), Expect = 0.16
Identities = 19/89 (21%), Positives = 45/89 (50%)
Frame = +2
Query: 68 LTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGGVDDSI 247
L+S + + +EW + + S+ L ++ + + + +GG+ I
Sbjct: 3841 LSSQRHVNDHEWHSILVEEMDASIRLMVDSMGNTSLVVPENCRGLRPERHLLLGGL---I 3897
Query: 248 VLNNNTGVTGGFSGCIKDVMIYENAVDIV 334
+L++++ V+ GF GC+ V++ E A+D++
Sbjct: 3898 LLHSSSNVSQGFEGCLDAVVVNEEALDLL 3926
>AB177851-1|BAD66829.1| 573|Homo sapiens KIAA0811 splice variant 1
protein.
Length = 573
Score = 34.3 bits (75), Expect = 0.16
Identities = 19/89 (21%), Positives = 45/89 (50%)
Frame = +2
Query: 68 LTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGGVDDSI 247
L+S + + +EW + + S+ L ++ + + + +GG+ I
Sbjct: 65 LSSQRHVNDHEWHSILVEEMDASIRLMVDSMGNTSLVVPENCRGLRPERHLLLGGL---I 121
Query: 248 VLNNNTGVTGGFSGCIKDVMIYENAVDIV 334
+L++++ V+ GF GC+ V++ E A+D++
Sbjct: 122 LLHSSSNVSQGFEGCLDAVVVNEEALDLL 150
>AB011535-1|BAA32463.1| 573|Homo sapiens MEGF1 protein.
Length = 573
Score = 34.3 bits (75), Expect = 0.16
Identities = 19/89 (21%), Positives = 45/89 (50%)
Frame = +2
Query: 68 LTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGGVDDSI 247
L+S + + +EW + + S+ L ++ + + + +GG+ I
Sbjct: 65 LSSQRHVNDHEWHSILVEEMDASIRLMVDSMGNTSLVVPENCRGLRPERHLLLGGL---I 121
Query: 248 VLNNNTGVTGGFSGCIKDVMIYENAVDIV 334
+L++++ V+ GF GC+ V++ E A+D++
Sbjct: 122 LLHSSSNVSQGFEGCLDAVVVNEEALDLL 150
>AL645608-14|CAI15576.1| 270|Homo sapiens agrin protein.
Length = 270
Score = 33.9 bits (74), Expect = 0.21
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +2
Query: 32 RYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKIN----LVHSYEQWXXXXXXX 199
RYDLG V+ S + + WT V + R G +L++ ++ +
Sbjct: 1 RYDLG--KGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGESPKSRKVPHTV 58
Query: 200 XXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMI 310
P++VGG D L V+ GF G I+ V +
Sbjct: 59 LNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSL 95
>BC004220-1|AAH04220.2| 116|Homo sapiens AGRN protein protein.
Length = 116
Score = 33.1 bits (72), Expect = 0.36
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +2
Query: 35 YDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXX 214
Y+LG + PVVL S + N W V R SL++
Sbjct: 3 YNLGSQ--PVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPLGATQLDTDG 60
Query: 215 PMFVGGVDDSIVLNNNTGVTG-GFSGCIKDVMIYENAVDIVNSSIQSANVQEC 370
+++GG+ + V G GF GC++DV++ + + ++ ++ ++ C
Sbjct: 61 ALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRPC 113
>EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein.
Length = 1547
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G L + +DLG + +SNK L N+W +V I+R ++ ++KI+ + +
Sbjct: 1000 GYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGA 1057
Query: 194 XXXXXXXPMFVGGVDDSIV--LNNNTGVTGGFSGCIKDVMIYENAVDIVNSSI 346
+++GGV L GF GC+ V + D+++ ++
Sbjct: 1058 RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 1110
>BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein.
Length = 1496
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G L + +DLG + +SNK L N+W +V I+R ++ ++KI+ + +
Sbjct: 952 GYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGA 1009
Query: 194 XXXXXXXPMFVGGVDDSIV--LNNNTGVTGGFSGCIKDVMIYENAVDIVNSSI 346
+++GGV L GF GC+ V + D+++ ++
Sbjct: 1010 RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 1062
>AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G L + +DLG + +SNK L N+W +V I+R ++ ++KI+ + +
Sbjct: 520 GYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGA 577
Query: 194 XXXXXXXPMFVGGVDDSIV--LNNNTGVTGGFSGCIKDVMIYENAVDIVNSSI 346
+++GGV L GF GC+ V + D+++ ++
Sbjct: 578 RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 630
>AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protein
protein.
Length = 1477
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G L + +DLG + +SNK L N+W +V I+R ++ ++KI+ + +
Sbjct: 960 GYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGA 1017
Query: 194 XXXXXXXPMFVGGVDDSIV--LNNNTGVTGGFSGCIKDVMIYENAVDIVNSSI 346
+++GGV L GF GC+ V + D+++ ++
Sbjct: 1018 RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 1070
>AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein.
Length = 1542
Score = 32.7 bits (71), Expect = 0.48
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G L + +DLG + +SNK L N+W +V I+R ++ ++KI+ + +
Sbjct: 998 GYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGA 1055
Query: 194 XXXXXXXPMFVGGVDDSIV--LNNNTGVTGGFSGCIKDVMIYENAVDIVNSSI 346
+++GGV L GF GC+ V + D+++ ++
Sbjct: 1056 RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 1108
>U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6
protein.
Length = 421
Score = 31.9 bits (69), Expect = 0.84
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 381 SLLLHSCTLADWIEELTMSTAFS*IITSLMHPLNPPVTPVLLFNTIESSTPPTNMGVSNL 202
S + S + + W+ + + S S IT+ + L+ TPV N + SS P+ S +
Sbjct: 64 SSFISSSSWSSWLPQNSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTV 123
Query: 201 RSSVRPSNHCS 169
S V PS+H S
Sbjct: 124 SSYV-PSSHSS 133
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1700 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1758
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1759 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1815
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1693 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1751
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1752 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1808
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1458 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1516
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1517 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1573
>X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein.
Length = 414
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 291 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 349
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 350 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 406
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1693 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1751
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1752 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1808
>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
Length = 1642
Score = 30.3 bits (65), Expect = 2.6
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLG-GENKPVVLTSNKTLPANEWTDVHIAR-------FGHS-VSLKIN 154
L++++G + +LG G + +V N N W DV + R GH+ V++ ++
Sbjct: 315 LSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVD 374
Query: 155 LVHSYEQWXXXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYEN 319
+ + + ++GG ++ L + V+ F GC+KDV +Y+N
Sbjct: 375 GILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSP-VSNNFMGCLKDV-VYKN 427
Score = 29.1 bits (62), Expect = 5.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANE--WTDVHIARF-GHSVSLKINLVHSYEQWXXX 187
G + + +DLG N P ++ N P N+ W +V ++R G+ +LKI+ + Q
Sbjct: 933 GYIHYVFDLG--NGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKID-SRTVTQ-HSN 988
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++GG+ ++ N V GF GC+ V + D++ ++
Sbjct: 989 GARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADAL 1043
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1693 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1751
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1752 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1808
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1700 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1758
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1759 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1815
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
++NG++ + + G + +T ++L W + + R + V L ++ ++
Sbjct: 1729 MKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVV-GPL 1787
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANV 361
P+FVGGV +S+ L + F+GCI+ +I + V +++ S V
Sbjct: 1788 NPKPIDHREPVFVGGVPESL-LTPRLAPSKPFTGCIRHFVIDGHPVSFSKAALVSGAV 1844
>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
protein.
Length = 1434
Score = 30.3 bits (65), Expect = 2.6
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLG-GENKPVVLTSNKTLPANEWTDVHIAR-------FGHS-VSLKIN 154
L++++G + +LG G + +V N N W DV + R GH+ V++ ++
Sbjct: 68 LSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVD 127
Query: 155 LVHSYEQWXXXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYEN 319
+ + + ++GG ++ L + V+ F GC+KDV +Y+N
Sbjct: 128 GILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSP-VSNNFMGCLKDV-VYKN 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANE--WTDVHIARF-GHSVSLKINLVHSYEQWXXX 187
G + + +DLG N P ++ N P N+ W +V ++R G+ +LKI+ + Q
Sbjct: 695 GYIHYVFDLG--NGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKID-SRTVTQ-HSN 750
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++GG+ ++ N V GF GC+ V + D++ ++
Sbjct: 751 GARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADAL 805
>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
Length = 1658
Score = 30.3 bits (65), Expect = 2.6
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLG-GENKPVVLTSNKTLPANEWTDVHIAR-------FGHS-VSLKIN 154
L++++G + +LG G + +V N N W DV + R GH+ V++ ++
Sbjct: 331 LSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVD 390
Query: 155 LVHSYEQWXXXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYEN 319
+ + + ++GG ++ L + V+ F GC+KDV +Y+N
Sbjct: 391 GILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSP-VSNNFMGCLKDV-VYKN 443
Score = 29.1 bits (62), Expect = 5.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANE--WTDVHIARF-GHSVSLKINLVHSYEQWXXX 187
G + + +DLG N P ++ N P N+ W +V ++R G+ +LKI+ + Q
Sbjct: 949 GYIHYVFDLG--NGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKID-SRTVTQ-HSN 1004
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++GG+ ++ N V GF GC+ V + D++ ++
Sbjct: 1005 GARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADAL 1059
>BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPV-VLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXX 190
G L+ RY+LGG +P + ++ + + V+I R ++ LK++ S
Sbjct: 1083 GSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSS 1142
Query: 191 XXXXXXXXPMFVGGVDDSIVLNNNTGV--TGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G V ++ ++ T GF+GC+ V N + + ++++ N
Sbjct: 1143 DTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQF--NQIAPLKAALRQTN 1198
>BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPV-VLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXX 190
G L+ RY+LGG +P + ++ + + V+I R ++ LK++ S
Sbjct: 1083 GSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSS 1142
Query: 191 XXXXXXXXPMFVGGVDDSIVLNNNTGV--TGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G V ++ ++ T GF+GC+ V N + + ++++ N
Sbjct: 1143 DTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQF--NQIAPLKAALRQTN 1198
>AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ35214 fis, clone PROST1000512, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 325
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVTPVLLFNTIESSTPPTNMGVSNLRSSVRPSNH 175
+ W+ + + S S IT+ + L+ TPV N + SS P+ S + S V PS+H
Sbjct: 60 SSWLPQNSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSYV-PSSH 118
Query: 174 CS 169
S
Sbjct: 119 SS 120
>AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated protein
2 protein.
Length = 1331
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPV-VLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXX 190
G L+ RY+LGG +P + ++ + + V+I R ++ LK++ S
Sbjct: 1083 GSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSS 1142
Query: 191 XXXXXXXXPMFVGGVDDSIVLNNNTGV--TGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G V ++ ++ T GF+GC+ V N + + ++++ N
Sbjct: 1143 DTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQF--NQIAPLKAALRQTN 1198
>AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecule
Caspr2 protein.
Length = 1331
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPV-VLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXX 190
G L+ RY+LGG +P + ++ + + V+I R ++ LK++ S
Sbjct: 1083 GSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSS 1142
Query: 191 XXXXXXXXPMFVGGVDDSIVLNNNTGV--TGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G V ++ ++ T GF+GC+ V N + + ++++ N
Sbjct: 1143 DTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQF--NQIAPLKAALRQTN 1198
>AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein.
Length = 1339
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPV-VLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXX 190
G L+ RY+LGG +P + ++ + + V+I R ++ LK++ S
Sbjct: 1091 GSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSS 1150
Query: 191 XXXXXXXXPMFVGGVDDSIVLNNNTGV--TGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G V ++ ++ T GF+GC+ V N + + ++++ N
Sbjct: 1151 DTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQF--NQIAPLKAALRQTN 1206
>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
Length = 1712
Score = 29.1 bits (62), Expect = 5.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANE--WTDVHIARF-GHSVSLKINLVHSYEQWXXX 187
G + + +DLG N P ++ N P N+ W +V ++R G+ +LKI+ + Q
Sbjct: 973 GYIHYVFDLG--NGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKID-SRTVTQ-HSN 1028
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++GG+ ++ N V GF GC+ V + D++ ++
Sbjct: 1029 GARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADAL 1083
>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
Length = 1712
Score = 29.1 bits (62), Expect = 5.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANE--WTDVHIARF-GHSVSLKINLVHSYEQWXXX 187
G + + +DLG N P ++ N P N+ W +V ++R G+ +LKI+ + Q
Sbjct: 973 GYIHYVFDLG--NGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKID-SRTVTQ-HSN 1028
Query: 188 XXXXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++GG+ ++ N V GF GC+ V + D++ ++
Sbjct: 1029 GARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADAL 1083
>AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens cDNA
FLJ31966 fis, clone NT2RP7007925, weakly similar to Homo
sapiens contactin associated protein (Caspr) mRNA. ).
Length = 963
Score = 28.7 bits (61), Expect = 7.8
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +2
Query: 20 KLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKI-NLVHSYEQWXXXXXX 196
++ F D+G +V+ S L N+W V R SL++ NL S +
Sbjct: 848 EITFAIDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGHF 907
Query: 197 XXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQE-CS 373
+FVGG GF GCI+ + + +D+ + ++ V+ CS
Sbjct: 908 RLQLNSQLFVGGTSSR---------QKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCS 958
>AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein.
Length = 1392
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G + + +DLG + S++ L N+W +V I R + SLK++
Sbjct: 915 GYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT--KVVTQVINGA 972
Query: 194 XXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++ G+ + N V GF GC+ V + D++N ++
Sbjct: 973 KNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDAL 1025
>AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein.
Length = 328
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G + + +DLG + S++ L N+W +V I R + SLK++
Sbjct: 167 GYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT--KVVTQVINGA 224
Query: 194 XXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++ G+ + N V GF GC+ V + D++N ++
Sbjct: 225 KNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDAL 277
>AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G + + +DLG + S++ L N+W +V I R + SLK++
Sbjct: 167 GYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT--KVVTQVINGA 224
Query: 194 XXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++ G+ + N V GF GC+ V + D++N ++
Sbjct: 225 KNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDAL 277
>AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.
Length = 1097
Score = 28.7 bits (61), Expect = 7.8
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
L + +GKL F+ D G ++ S + + W V + + SL ++ + +
Sbjct: 393 LKIVDGKLWFQLDCGS-GPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRA 451
Query: 182 XXXXXXXXXXXPMFVGGV--DDSIVLNNNTGVT---GGFSGCIKDVMIYENAVDIVNSSI 346
++ G + D+I +T VT GF GC+ V++ N + + N
Sbjct: 452 PLYFQTLSTESSIYFGALVQADNIRSLTDTRVTQVLSGFQGCLDSVILNNNELPLQNKRS 511
Query: 347 QSANV 361
A V
Sbjct: 512 SFAEV 516
>AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein.
Length = 1205
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 17 GKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSV-SLKINLVHSYEQWXXXXX 193
G + + +DLG + S++ L N+W +V I R + SLK++
Sbjct: 697 GYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT--KVVTQVINGA 754
Query: 194 XXXXXXXPMFVGGVDDSIVLNNNTGVTG--GFSGCIKDVMIYENAVDIVNSSI 346
+++ G+ + N V GF GC+ V + D++N ++
Sbjct: 755 KNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDAL 807
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,907,890
Number of Sequences: 237096
Number of extensions: 1199281
Number of successful extensions: 6205
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 6001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6180
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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