Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M05
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 46 1e-05
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 46 1e-05
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 46 1e-05
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 46 1e-05
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 44 6e-05
U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical pr... 38 0.002
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 37 0.006
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 32 0.14
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 32 0.14
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 32 0.14
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 32 0.18
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 30 0.55
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 30 0.55
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 30 0.55
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 30 0.55
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 30 0.55
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 30 0.55
AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class I... 30 0.55
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 30 0.55
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 30 0.55
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF067609-7|AAC17536.1| 162|Caenorhabditis elegans Hypothetical ... 27 3.9
AF067609-6|AAC17535.1| 203|Caenorhabditis elegans Hypothetical ... 27 3.9
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 27 5.1
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 27 5.1
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 27 5.1
U55364-1|AAA97970.2| 226|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein. 27 6.8
AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein. 27 6.8
AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte ... 27 6.8
AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte ... 27 6.8
AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte ... 27 6.8
AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte ... 27 6.8
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 26 9.0
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 26 9.0
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 26 9.0
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ +G++ F YD G V++ S+K++ W + ++R G S L ++ +SYE
Sbjct: 3364 LEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVD-DNSYESEGAA 3420
Query: 188 XXXXXXXXX--PMFVGGVDDSIV---LNNNTGVTGGFSGCIKDVMIYENAVD 328
P +VGGV + N GV FSGCIKD + ++D
Sbjct: 3421 NQNEDLIETQPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3472
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ +G++ F YD G V++ S+K++ W + ++R G S L ++ +SYE
Sbjct: 3396 LEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVD-DNSYESEGAA 3452
Query: 188 XXXXXXXXX--PMFVGGVDDSIV---LNNNTGVTGGFSGCIKDVMIYENAVD 328
P +VGGV + N GV FSGCIKD + ++D
Sbjct: 3453 NQNEDLIETQPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ +G++ F YD G V++ S+K++ W + ++R G S L ++ +SYE
Sbjct: 1210 LEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVD-DNSYESEGAA 1266
Query: 188 XXXXXXXXX--PMFVGGVDDSIV---LNNNTGVTGGFSGCIKDVMIYENAVD 328
P +VGGV + N GV FSGCIKD + ++D
Sbjct: 1267 NQNEDLIETQPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 1318
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ +G++ F YD G V++ S+K++ W + ++R G S L ++ +SYE
Sbjct: 3396 LEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVD-DNSYESEGAA 3452
Query: 188 XXXXXXXXX--PMFVGGVDDSIV---LNNNTGVTGGFSGCIKDVMIYENAVD 328
P +VGGV + N GV FSGCIKD + ++D
Sbjct: 3453 NQNEDLIETQPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ +G++ F YD G V++ S+K++ W + ++R G S L ++ +SYE
Sbjct: 3396 LEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVD-DNSYESEGAA 3452
Query: 188 XXXXXXXXX--PMFVGGVDDSIV---LNNNTGVTGGFSGCIKDVMIYENAVD 328
P +VGGV + N GV FSGCIKD + ++D
Sbjct: 3453 NQNEDLIETQPPFYVGGVPADLAGFARNLVVGVRSQFSGCIKDFKLNGKSLD 3504
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 43.6 bits (98), Expect = 6e-05
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ + NG L F Y+LGG L S + + + V R G ++I+ +
Sbjct: 3240 VGIVNGHLHFSYELGG--GAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRS 3297
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTG--VTGGFSGCIKDVMIYENAVDIVNSSIQSA 355
+FVGGV D ++ TG + F GCI DV + +D++ ++I
Sbjct: 3298 TGILAMLNVDGNIFVGGVPD---ISKATGGLFSNNFVGCIADVELNGVKLDLMATAIDGK 3354
Query: 356 NVQEC 370
NV+ C
Sbjct: 3355 NVKPC 3359
Score = 34.3 bits (75), Expect = 0.034
Identities = 24/109 (22%), Positives = 49/109 (44%)
Frame = +2
Query: 53 NKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGG 232
+K V ++TL A E DV + + G+++ + ++ Q +F+GG
Sbjct: 2861 DKEVQKIRSETLEAGELIDVAVRQAGNALVMTVD----GNQVSTIETDTLKPGTEIFIGG 2916
Query: 233 VDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNN 379
+ + ++ V F GC+ +++I VD+ N S S ++ C +
Sbjct: 2917 LPPGLNSPDDV-VEQSFQGCVYEILINSQDVDLQNLS-SSGDISSCEES 2963
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 43.6 bits (98), Expect = 6e-05
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ + NG L F Y+LGG L S + + + V R G ++I+ +
Sbjct: 3240 VGIVNGHLHFSYELGG--GAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRS 3297
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTG--VTGGFSGCIKDVMIYENAVDIVNSSIQSA 355
+FVGGV D ++ TG + F GCI DV + +D++ ++I
Sbjct: 3298 TGILAMLNVDGNIFVGGVPD---ISKATGGLFSNNFVGCIADVELNGVKLDLMATAIDGK 3354
Query: 356 NVQEC 370
NV+ C
Sbjct: 3355 NVKPC 3359
Score = 34.3 bits (75), Expect = 0.034
Identities = 24/109 (22%), Positives = 49/109 (44%)
Frame = +2
Query: 53 NKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGG 232
+K V ++TL A E DV + + G+++ + ++ Q +F+GG
Sbjct: 2861 DKEVQKIRSETLEAGELIDVAVRQAGNALVMTVD----GNQVSTIETDTLKPGTEIFIGG 2916
Query: 233 VDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNN 379
+ + ++ V F GC+ +++I VD+ N S S ++ C +
Sbjct: 2917 LPPGLNSPDDV-VEQSFQGCVYEILINSQDVDLQNLS-SSGDISSCEES 2963
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 43.6 bits (98), Expect = 6e-05
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWX 181
+ + NG L F Y+LGG L S + + + V R G ++I+ +
Sbjct: 790 VGIVNGHLHFSYELGG--GAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRS 847
Query: 182 XXXXXXXXXXXPMFVGGVDDSIVLNNNTG--VTGGFSGCIKDVMIYENAVDIVNSSIQSA 355
+FVGGV D ++ TG + F GCI DV + +D++ ++I
Sbjct: 848 TGILAMLNVDGNIFVGGVPD---ISKATGGLFSNNFVGCIADVELNGVKLDLMATAIDGK 904
Query: 356 NVQEC 370
NV+ C
Sbjct: 905 NVKPC 909
Score = 34.3 bits (75), Expect = 0.034
Identities = 24/109 (22%), Positives = 49/109 (44%)
Frame = +2
Query: 53 NKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXXXPMFVGG 232
+K V ++TL A E DV + + G+++ + ++ Q +F+GG
Sbjct: 411 DKEVQKIRSETLEAGELIDVAVRQAGNALVMTVD----GNQVSTIETDTLKPGTEIFIGG 466
Query: 233 VDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNN 379
+ + ++ V F GC+ +++I VD+ N S S ++ C +
Sbjct: 467 LPPGLNSPDDV-VEQSFQGCVYEILINSQDVDLQNLS-SSGDISSCEES 513
>U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical
protein T19D12.6 protein.
Length = 779
Score = 38.3 bits (85), Expect = 0.002
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 LAVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QW 178
+ V N ++ LG + +L S + W + + R G V LK+N E +
Sbjct: 436 VTVENSFIKVYASLGVD--ATILRSENAVSLYHWHKLEVWRSGKGVLLKVNKQGWVESEL 493
Query: 179 XXXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
+F+G +DD+ + + + G F+GC+K + + N I+ S + N
Sbjct: 494 HASKLEIIEETGNIFIGSLDDNDIPSVVKDIEG-FAGCVKRIRL--NGKAILMQSTYATN 550
Query: 359 VQEC 370
V EC
Sbjct: 551 VTEC 554
Score = 27.1 bits (57), Expect = 5.1
Identities = 22/114 (19%), Positives = 41/114 (35%)
Frame = +2
Query: 32 RYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXXXXXXXXXX 211
R+ L + +VLT K + W V + R + V L +N +
Sbjct: 666 RFALNLGSGTIVLTHPKRIEDERWITVEVIRKRNLVKLSVNGEDPITGFAPEGAEQLNVY 725
Query: 212 XPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECS 373
+F+G + TG GCI + + + + + N+Q+C+
Sbjct: 726 RNIFIGNNFTPDGSPDGRDFTG-LDGCIISLRFDQTTISHPKQAKTAINIQDCA 778
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 36.7 bits (81), Expect = 0.006
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 5 AVRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKIN--LVHSYEQW 178
A+ + K F Y+LG + + +P N W V I R VS+ +N LV +
Sbjct: 1183 AMIDAKPHFVYELGSGLSYI---RGEPIPLNSWHTVRIERLAKDVSMFVNETLVKKHTSQ 1239
Query: 179 XXXXXXXXXXXXPMFVGGVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSAN 358
++VG V + I+ + + F G ++++ I E +++++ S +
Sbjct: 1240 SKNAHLDISKKDALYVGFVPEGIISHKVRKLNVPFEGELQELRINELPINLISVSYDARG 1299
Query: 359 V 361
+
Sbjct: 1300 I 1300
Score = 31.9 bits (69), Expect = 0.18
Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ GKL +LG + +++N T+ N W V R L ++
Sbjct: 1359 IEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSKKILHVVASP 1418
Query: 188 XXXXXXXXXPMFVGGVD-DSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQ 364
+++GG + L + ++ F GC+K++ I+ V+++ S++S
Sbjct: 1419 GDVNLDSNGLVYLGGANPKKHKLLKSLNLSNKFVGCVKNLKIFGAEVNLLVDSLKSIETP 1478
Query: 365 E-CSN 376
+ C N
Sbjct: 1479 KYCYN 1483
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 32.3 bits (70), Expect = 0.14
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = +2
Query: 23 LEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXXXXX 199
L F D + V S+ + V + R G +S+K++ + Q
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDSQSLSDETSV 2782
Query: 200 XXXXXPMFVGGVDDSIVL-NNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+ +GG D + NN +T F GCI DV + V + +A + CS
Sbjct: 2783 GTTSGRLILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEK-HNAQIGMCSM 2841
Query: 377 ND 382
+D
Sbjct: 2842 DD 2843
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 32.3 bits (70), Expect = 0.14
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = +2
Query: 23 LEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXXXXX 199
L F D + V S+ + V + R G +S+K++ + Q
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDSQSLSDETSV 2782
Query: 200 XXXXXPMFVGGVDDSIVL-NNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+ +GG D + NN +T F GCI DV + V + +A + CS
Sbjct: 2783 GTTSGRLILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEK-HNAQIGMCSM 2841
Query: 377 ND 382
+D
Sbjct: 2842 DD 2843
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 32.3 bits (70), Expect = 0.14
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = +2
Query: 23 LEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYE-QWXXXXXXX 199
L F D + V S+ + V + R G +S+K++ + Q
Sbjct: 2723 LHFGKDASSRKEVVTFRSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDSQSLSDETSV 2782
Query: 200 XXXXXPMFVGGVDDSIVL-NNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSN 376
+ +GG D + NN +T F GCI DV + V + +A + CS
Sbjct: 2783 GTTSGRLILGGFSDDLKPPNNEIPITSFFIGCISDVFLNMKRVSLAPEK-HNAQIGMCSM 2841
Query: 377 ND 382
+D
Sbjct: 2842 DD 2843
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 31.9 bits (69), Expect = 0.18
Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 8 VRNGKLEFRYDLGGENKPVVLTSNKTLPANEWTDVHIARFGHSVSLKINLVHSYEQWXXX 187
+ GKL +LG + +++N T+ N W V R L ++
Sbjct: 1349 IEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSKKILHVVASP 1408
Query: 188 XXXXXXXXXPMFVGGVD-DSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQ 364
+++GG + L + ++ F GC+K++ I+ V+++ S++S
Sbjct: 1409 GDVNLDSNGLVYLGGANPKKHKLLKSLNLSNKFVGCVKNLKIFGAEVNLLVDSLKSIETP 1468
Query: 365 E-CSN 376
+ C N
Sbjct: 1469 KYCYN 1473
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1114 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1170
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical protein
T05A10.1j protein.
Length = 1509
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 1182 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 1238
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 740 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 796
>AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class III
protein.
Length = 557
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 230 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 286
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 181 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 237
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 354 ADWIEELTMSTAFS*IITSLMHPLNPPVT-PVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
A +IE L T + T L P N PVT PVL+ +S P+ G S L S RP +
Sbjct: 85 AQFIERLVGGTYTN---TDLQGPSNAPVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQS 141
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 230 GVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNND 382
G+ D + + +N V SG I+ + ++ + SS+ +A V+EC+NND
Sbjct: 396 GISDVLKVASNQLVV---SGKIESGEVEKDDKVYIMSSVTAATVKECANND 443
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 230 GVDDSIVLNNNTGVTGGFSGCIKDVMIYENAVDIVNSSIQSANVQECSNND 382
G+ D + + +N V SG I+ + ++ + SS+ +A V+EC+NND
Sbjct: 414 GISDVLKVASNQLVV---SGKIESGEVEKDDKVYIMSSVTAATVKECANND 461
>AF067609-7|AAC17536.1| 162|Caenorhabditis elegans Hypothetical
protein C23H5.8b protein.
Length = 162
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 251 LNNNTGVTGGFSGCIKDV---MIYENAVDIVNSSIQSANVQECSNND 382
+NNNTGV F+ C+ + M+ E+A+ S+ + ++Q+ + D
Sbjct: 104 VNNNTGVVYCFAICLNETLQNMVIESALKSNQPSVVAQDIQKTTQLD 150
>AF067609-6|AAC17535.1| 203|Caenorhabditis elegans Hypothetical
protein C23H5.8a protein.
Length = 203
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 251 LNNNTGVTGGFSGCIKDV---MIYENAVDIVNSSIQSANVQECSNND 382
+NNNTGV F+ C+ + M+ E+A+ S+ + ++Q+ + D
Sbjct: 104 VNNNTGVVYCFAICLNETLQNMVIESALKSNQPSVVAQDIQKTTQLD 150
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 TGGFSGCIKDVMIYENAVDIVNSSIQSANVQE-CS 373
+ GF GCI + I ENA+D+ + V CS
Sbjct: 1020 SNGFRGCISTLRINENALDLYEDADSRMKVNRGCS 1054
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 309 IITSLMHPLNPPVTPVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
++ SL H PP P+ T+ + PP +SNLR+ V +N
Sbjct: 230 VVASLFH--QPPSHPLFRQQTV--TKPPNPHRISNLRAKVEMTN 269
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 309 IITSLMHPLNPPVTPVLLFNTIESSTPPTNMGVSNLRSSVRPSN 178
++ SL H PP P+ T+ + PP +SNLR+ V +N
Sbjct: 230 VVASLFH--QPPSHPLFRQQTV--TKPPNPHRISNLRAKVEMTN 269
>U55364-1|AAA97970.2| 226|Caenorhabditis elegans Hypothetical
protein F21C10.10 protein.
Length = 226
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 345 IEELTMSTAFS*IITSLMHPLNPPVTP 265
++++ S++ S +I++L+ PLN P TP
Sbjct: 190 MQQVEKSSSLSKLISTLVTPLNAPATP 216
>AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein.
Length = 668
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 577 VESNPPPSELGSPTTRSAYAPSN 599
>AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein.
Length = 611
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 577 VESNPPPSELGSPTTRSAYAPSN 599
>AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform b protein.
Length = 644
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 583 VESNPPPSELGSPTTRSAYAPSN 605
>AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform a protein.
Length = 611
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 577 VESNPPPSELGSPTTRSAYAPSN 599
>AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform d protein.
Length = 668
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 577 VESNPPPSELGSPTTRSAYAPSN 599
>AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform c protein.
Length = 619
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 246 IESSTPPTNMGVSNLRSSVRPSN 178
+ES+ PP+ +G RS+ PSN
Sbjct: 585 VESNPPPSELGSPTTRSAYAPSN 607
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 271 HACIIIQYYRIVNASNEHGCL*SEE 197
H C +I YY I+N+ N G + S E
Sbjct: 671 HKCRLIYYYEILNSENFRGSVASLE 695
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 26 EFRYDLGGENKPVVLTSNKTLPANEWTDVHIARF 127
+F Y L +N+PV T+ T+ E TD+ +F
Sbjct: 1006 DFEYTLENKNRPVEFTARVTIGNLEKTDLSEIKF 1039
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 26 EFRYDLGGENKPVVLTSNKTLPANEWTDVHIARF 127
+F Y L +N+PV T+ T+ E TD+ +F
Sbjct: 1006 DFEYTLENKNRPVEFTARVTIGNLEKTDLSEIKF 1039
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,434,256
Number of Sequences: 27780
Number of extensions: 182849
Number of successful extensions: 557
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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