Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L24
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   0.86 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/40 (27%), Positives = 14/40 (35%)
 Frame = -1

Query: 301 WLSAKDFLSDVSIAHTPLSLAQLLDTRSDLFNIYGEFLKN 182
           WLS   F       + P+   +  D   D    Y   LKN
Sbjct: 412 WLSCSSFFQQFFHCYCPIKFGRKADPNGDYIRKYLPVLKN 451


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +1

Query: 364 RRRGSGRAVRTGSRRSWISRHLKRKRHLPYPLANTSTGCYHLNTVSSVSIHQRRWDYFLV 543
           ++RG    V T   R+W+ +HL      PYP  +       L   + ++I Q   ++F+ 
Sbjct: 336 KKRGIFPKVATNILRAWLFQHLTH----PYPSEDQKK---QLAQDTGLTILQVN-NWFIN 387

Query: 544 YRRRVCKTL--RRNRPSFDAFTG 606
            RRR+ + +  + NR  F    G
Sbjct: 388 ARRRIVQPMIDQSNRAVFSPHAG 410


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 427 SADLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMSP 311
           SA  + F ES+Y+ L +      R   + YA C ++  P
Sbjct: 14  SAAPAEFYESRYDHLDVESILNNRRMVNYYAACLLSKGP 52


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 281 EILGGQPSSRWRHGYVTCGIVGERVPSSGV 370
           E+L  +P++ WR       +  ER+ S G+
Sbjct: 544 EVLWSEPTNTWREAEQRILVQRERLISLGI 573


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 462 CKRIGEMSLSFQVPTYPTSTRASTNCS 382
           C  IGE ++S + P +P       NC+
Sbjct: 181 CTLIGEDNISAKNPWFPRHASDLDNCN 207


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 364 RRRGSGRAVRTGSRRSWISRHLKRKRHLPYP 456
           ++RG    V T   R+W+ +HL      PYP
Sbjct: 180 KKRGIFPKVATNILRAWLFQHLTH----PYP 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,524
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)