Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L24
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical ...    32   0.37 
AF047655-12|AAD34650.2|  171|Caenorhabditis elegans Hypothetical...    30   1.5  
AF002198-1|AAF99929.1|  201|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AF002197-2|AAB53983.2|  486|Caenorhabditis elegans Hypothetical ...    27   7.9  

>AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical
           protein T05E7.3 protein.
          Length = 997

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 354 SRPPASRFRQSSSYWLSSKLDKSALETKATSPLSSCKHFHGLLSLE 491
           + P ASRF +SS  W   K+ K+ L       +     FH L S+E
Sbjct: 737 TNPKASRFSESSLSWKDVKMSKTVLSFDVFDRIEKIVPFHILTSIE 782


>AF047655-12|AAD34650.2|  171|Caenorhabditis elegans Hypothetical
           protein C17B7.12 protein.
          Length = 171

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 499 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 407
           K CS+     KC++ED     F S  D+ NF
Sbjct: 119 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 149


>AF002198-1|AAF99929.1|  201|Caenorhabditis elegans Hypothetical
           protein F35F10.5 protein.
          Length = 201

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 499 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 407
           K CS+     KC++ED     F S  D+ NF
Sbjct: 118 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 148


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
 Frame = -2

Query: 420 TYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPP---RISFPTSQSPTLR 250
           T  T+T   T  +  T TP   T +PT    T P    E    P     + PT+ +PT  
Sbjct: 70  TSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTT-PTTTTETTTTPTTETTTTPTTTTPTTT 128

Query: 249 *AWPNCWTLGATCSIFTANS*RTTTLFSVT 160
              P   T   T +  T  +  TTT  + T
Sbjct: 129 TTTPTTTTTETTTTPTTTTTETTTTPTTTT 158



 Score = 27.9 bits (59), Expect = 5.9
 Identities = 25/88 (28%), Positives = 34/88 (38%)
 Frame = -2

Query: 423 PTYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQSPTLR*A 244
           PT PT+T  +T  +  T TP   T +PT    T      E    P  + PT+ + T    
Sbjct: 78  PTTPTTT--TTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTT 135

Query: 243 WPNCWTLGATCSIFTANS*RTTTLFSVT 160
                T   T +  T  +  TTT    T
Sbjct: 136 TTETTTTPTTTTTETTTTPTTTTTTPTT 163


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = -1

Query: 262  AHTPLSLAQ---LLDTRSDLFNIYGEFLKNNNVI---FSNDATGLATTEKL 128
            AHT +  AQ   LL + SD+FN Y    K+  V+    +N    + TTEKL
Sbjct: 1820 AHTLVQEAQSDRLLSSLSDIFNFYSYLRKHPLVVRQRLNNVGAQVGTTEKL 1870


>U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical
           protein F52C9.5 protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 417 KSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG 530
           K+ +E K       CK F  L S   C F+ + + P+G
Sbjct: 288 KACIENKINGVALKCKSFDFLSSTSTCAFTSEAAVPVG 325


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
           protein C53B4.4d protein.
          Length = 1301

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
 Frame = +3

Query: 225 VSSSWAKLNGVWAIETSERKSLADNQVLDGDMAMLHVA*LENESRPPASRFRQSSSYWLS 404
           V+++    N    + T E  SLAD         ++ +  +   S   A+RF QS++  L+
Sbjct: 350 VAATGNNTNRAVKVCTVEDNSLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLT 409

Query: 405 SKLDKS-----ALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLGLFSGLSTPGMQDP 569
             +++S       E+KAT+   + +  H + +LE      +T +      GL       P
Sbjct: 410 VLVERSLDDIDEEESKATA--LAARRRHSVSNLESSVIDTNTESVASSIFGLDAHKFDKP 467

Query: 570 PKKSAK 587
           P  S +
Sbjct: 468 PSVSVQ 473


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
           protein C53B4.4c protein.
          Length = 1304

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
 Frame = +3

Query: 225 VSSSWAKLNGVWAIETSERKSLADNQVLDGDMAMLHVA*LENESRPPASRFRQSSSYWLS 404
           V+++    N    + T E  SLAD         ++ +  +   S   A+RF QS++  L+
Sbjct: 350 VAATGNNTNRAVKVCTVEDNSLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLT 409

Query: 405 SKLDKS-----ALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLGLFSGLSTPGMQDP 569
             +++S       E+KAT+   + +  H + +LE      +T +      GL       P
Sbjct: 410 VLVERSLDDIDEEESKATA--LAARRRHSVSNLESSVIDTNTESVASSIFGLDAHKFDKP 467

Query: 570 PKKSAK 587
           P  S +
Sbjct: 468 PSVSVQ 473


>AF002197-2|AAB53983.2|  486|Caenorhabditis elegans Hypothetical
           protein F20H11.1 protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +3

Query: 348 NESRPPASRFRQSSSYWLSSKLDKSALE 431
           N+S  P++R R+SS  WL SK+D++ ++
Sbjct: 12  NQSSTPSTRSRKSS--WLISKIDENEID 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,018,179
Number of Sequences: 27780
Number of extensions: 308056
Number of successful extensions: 1124
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)