Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L23
(411 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 27 1.1
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 27 1.1
SPCC4F11.04c |||mannosyltransferase complex subunit |Schizosacch... 27 1.5
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 26 2.0
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 25 4.6
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 25 6.1
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 25 6.1
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 25 6.1
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 24 8.0
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 24 8.0
SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c... 24 8.0
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 24 8.0
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 27.1 bits (57), Expect = 1.1
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 DTMSKTLYANAVF-VDIHSKLRDVFQDYLTRIYKGRAVNVDFSRETEVKETINEWV 337
D T Y +A +D +RD+F+ Y TRI+ + S + + N++V
Sbjct: 693 DRKKLTFYYHAKQRIDFRELVRDLFKVYKTRIWMCAVSGTNMSSPASINASTNQFV 748
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 27.1 bits (57), Expect = 1.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 54 VALEIPMMNLLAPSVFPKMF*QTVKATSI 140
+A +PM N+ + PK F +T+K T +
Sbjct: 546 IAAPLPMANVDTDKIIPKQFLKTIKRTGL 574
>SPCC4F11.04c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 26.6 bits (56), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 92 LGFSQDVLANRQSHEYFSELIHNLNTN 172
+G S DV+ + H YF +I NL N
Sbjct: 190 VGVSNDVMGSVPHHPYFELIIQNLEKN 216
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +2
Query: 143 SELIHNLNTNDTMSKTLYANAVFVDIHSKLRDVFQDYLTRIYKGRAVNVDFSRET 307
+E IH L + +++T +AN + + YL + YK +N + T
Sbjct: 198 AETIHGLRLGNNLTRTFWANDEPSPVDQNMYGSHPYYLEQRYKADGINSTLNETT 252
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.0 bits (52), Expect = 4.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 210 LLTYTASYAMCFKTISLEFTRAERSMSILVVKLRSKRLLT 329
L TY +YA + ++SLEF + + V + RLL+
Sbjct: 795 LRTYLLAYAAFYDSVSLEFLATTFDLPVQRVTVIVSRLLS 834
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 24.6 bits (51), Expect = 6.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 91 PRFFPRCFSKPSKPRVFQRTNT*P*HQRHYV-EDTLRQCCIC*HTQQATR 237
PR + RC SKP ++ Q + P ++ V D L + C H +A R
Sbjct: 325 PRVYSRCNSKPVSLKIQQLKSLYPSDKKLIVGRDQLTKACGVTHKLRAFR 374
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.6 bits (51), Expect = 6.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 257 TRIYKGRAVNVDFSRETEVKETINEWVKERDQKGKLENFLKE 382
T + GR VN +S V +W+++ K K LKE
Sbjct: 313 TALLDGRKVNFCYSSRNYVSRPFKQWLEQLKLKYKENLKLKE 354
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 24.6 bits (51), Expect = 6.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 236 DVFQDYLTRIYKGRAVNVDFS 298
D + DYL IY+ V +D+S
Sbjct: 452 DTYDDYLDPIYEAIKVRIDYS 472
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 24.2 bits (50), Expect = 8.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 218 IHSKLRDVFQDYLTRIYKGRAVNVDFSRETEVKETI 325
+H+ L DVFQD YK ++VN ++ T+
Sbjct: 85 VHNTLEDVFQD--IESYKPKSVNTSAKSFRQLVNTL 118
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 24.2 bits (50), Expect = 8.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 281 VNVDFSRETEVKETINEWVKERD 349
VN D + EVK+ + EW K D
Sbjct: 1365 VNSDVDIQQEVKQQLEEWRKHGD 1387
>SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 24.2 bits (50), Expect = 8.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 296 SRETEVKETINEWVKERDQKGKLENFLKENLPASTKT 406
S +T + + E K R+ + +FLK NLP T++
Sbjct: 67 SSKTLAELSKGELAKAREDLKSVLSFLKNNLPVDTES 103
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 24.2 bits (50), Expect = 8.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 92 LGFSQDVLANRQSHEYFSELIHNLN 166
+G+S D A H + + IHNL+
Sbjct: 176 IGYSNDWFAATPKHPFLYQAIHNLS 200
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,609,981
Number of Sequences: 5004
Number of extensions: 30213
Number of successful extensions: 117
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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