Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L22
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    30   1.9  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    29   4.4  

>Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical
           protein ZK822.1 protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 55  SPGLQNSARGPFSTQTSGRSSFIACRSVRRRS 150
           SP   +S+R P  T T+ RSSF+    +RRRS
Sbjct: 203 SPSSASSSRDPSETMTTSRSSFLDLLGLRRRS 234


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 320  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 442
            IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
           protein Y48G1C.5 protein.
          Length = 1161

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 322 DSATIFCRTSKGTLTPAPEVHGVERESSVRSSDLELSIVQAPIVLNIVTGSL 167
           D A +  + +K TLT AP+   +E  S + +S+++  + Q+  +L  V   L
Sbjct: 378 DEAKVIAQCAKSTLTTAPDFTNLEELSKI-ASNIDTELEQSKSILKSVMNQL 428


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
           protein Y80D3A.8 protein.
          Length = 1293

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = +2

Query: 284 STLAGTTEYSSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGK 463
           + L G+ EY +A+G+        L  +TA    D  N H  S+  + +      +T + K
Sbjct: 159 TNLTGSVEYFNAVGNFQRDFNSSLFESTA-EKFDGFNEHITSILKSSLKDTSFPITGSAK 217

Query: 464 VNLFH 478
           + +F+
Sbjct: 218 LKVFN 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,774,635
Number of Sequences: 27780
Number of extensions: 360815
Number of successful extensions: 996
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)