Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L20
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   1.9  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   1.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   3.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.4  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.7  

>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 223 YNR*YYSPKSNNIRDK*KNVFFNVSHLE 140
           YN   Y+  +NN  +  K +++N++++E
Sbjct: 89  YNYSNYNNYNNNYNNYNKKLYYNINYIE 116


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 223 YNR*Y--YSPKSNNIRDK*KNVFFNVSHLE 140
           YN  Y  Y+  +NN  +  K +++N++++E
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKLYYNINYIE 359


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 208 YSPKSNNIRDK*KNVFFNVSHLE 140
           Y+  +NN  +  K +++N++++E
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYIE 120


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 208 YSPKSNNIRDK*KNVFFNVSHLE 140
           Y+  +NN  +  K +++N++++E
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYIE 120


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 208 YSPKSNNIRDK*KNVFFNVSHLE 140
           Y+  +NN  +  K +++N++++E
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYIE 120


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 208 YSPKSNNIRDK*KNVFFNVSHLE 140
           Y+  +NN  +  K +++N++++E
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYIE 120


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 408 SILGTPFGYKFPWLLILLATGSIFT 482
           S  G PF Y++ +  +L  +G I T
Sbjct: 217 SFQGPPFTYRYGFSFLLYVSGFITT 241


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = -2

Query: 277 SNVADARQYTMRRHKIK*YNR*YYSPKSNNIRDK*KNVFFNVSHLEI 137
           S++++  +Y+   +    YN  Y +  +NN +   KN   N+  + +
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPV 129


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = -2

Query: 277 SNVADARQYTMRRHKIK*YNR*YYSPKSNNIRDK*KNVFFNVSHLEI 137
           S++++  +Y+   +    YN  Y +  +NN +   KN   N+  + +
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPV 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,470
Number of Sequences: 438
Number of extensions: 2742
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)