Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L19
(431 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q13404 Cluster: Ubiquitin-conjugating enzyme E2 variant... 40 0.017
UniRef50_Q9U2P7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.64
UniRef50_A6X924 Cluster: Ubiquitin-conjugating enzyme E2 variant... 34 1.5
UniRef50_Q4AII0 Cluster: Transposase, IS4; n=1; Chlorobium phaeo... 33 1.9
UniRef50_Q21353 Cluster: Putative sodium-dependent excitatory am... 33 2.6
UniRef50_A1G7D6 Cluster: Major facilitator superfamily MFS_1; n=... 33 3.4
UniRef50_A7RFU2 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.4
UniRef50_Q4J944 Cluster: Conserved protein; n=1; Sulfolobus acid... 32 5.9
UniRef50_A5Z8P0 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_Q8SRD5 Cluster: DNA primase; n=1; Encephalitozoon cunic... 31 7.8
UniRef50_Q7MWN8 Cluster: Uncharacterized transporter PG_0562; n=... 31 7.8
>UniRef50_Q13404 Cluster: Ubiquitin-conjugating enzyme E2 variant 1;
n=134; Eukaryota|Rep: Ubiquitin-conjugating enzyme E2
variant 1 - Homo sapiens (Human)
Length = 221
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 273 SIHWGLHIE*DMTLTLRYGLIIGPARVHLNYILCSLITESDPRDPDEPLVAR 428
++ WGL + DMTLT G+IIGP R + SL E P+ P+ P R
Sbjct: 106 TVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVR 157
>UniRef50_Q9U2P7 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1435
Score = 35.1 bits (77), Expect = 0.64
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 428 ASYKWLIRIPRITFSYERTQYIIKMNTCGTND--QAIAKSESHVLFDM*SPVNGSRHSLY 255
+SYK+ IR Y +Y+ C +ND Q I SESH+ F R+ Y
Sbjct: 339 SSYKFCIRC--FNGYYNEEKYVRHFEDCMSNDPIQMIKPSESHIEFSSLQKTQKHRYVCY 396
Query: 254 VDVDPVRLKLE 222
D + V KL+
Sbjct: 397 ADFESVIYKLD 407
>UniRef50_A6X924 Cluster: Ubiquitin-conjugating enzyme E2 variant 2;
n=5; Murinae|Rep: Ubiquitin-conjugating enzyme E2
variant 2 - Mus musculus (Mouse)
Length = 103
Score = 33.9 bits (74), Expect = 1.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 273 SIHWGLHIE*DMTLTLRYGLIIGPARV 353
++ WGL + DMTLT G+IIGP RV
Sbjct: 30 TVSWGLEDDEDMTLTRWTGMIIGPPRV 56
>UniRef50_Q4AII0 Cluster: Transposase, IS4; n=1; Chlorobium
phaeobacteroides BS1|Rep: Transposase, IS4 - Chlorobium
phaeobacteroides BS1
Length = 357
Score = 33.5 bits (73), Expect = 1.9
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = -1
Query: 407 RIPRITFSYERTQYIIKMNTCGTNDQAIAKSESH--VLFDM*SPVNGSRHSLY-VDVDPV 237
RI ++ S+ Y I+M+ C + KSE VL + SP Y VD+ P+
Sbjct: 125 RIFKLILSHG-ADYCIRMSMCSNFVKDFLKSEKQDLVLTWVPSPKTKENCQKYKVDIKPI 183
Query: 236 RLKLERLEVAQGLT 195
R++L R++++ G+T
Sbjct: 184 RVRLVRIDLSSGIT 197
>UniRef50_Q21353 Cluster: Putative sodium-dependent excitatory amino
acid transporter glt-3; n=2; Caenorhabditis|Rep:
Putative sodium-dependent excitatory amino acid
transporter glt-3 - Caenorhabditis elegans
Length = 532
Score = 33.1 bits (72), Expect = 2.6
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +2
Query: 59 LCVLLIDQNLLNLVKFYY------PFCFCT*LLYLSLRIAMPRMIGIFATQSSGLVLPLT 220
+C L+I +LL L Y+ PF F T +L +L A F T SSG LP+T
Sbjct: 267 ICGLMI-HSLLTLPLLYFLVTKKSPFAFMTGMLQ-ALATA-------FGTASSGATLPVT 317
Query: 221 FRVLDELDPRQHRVSVVIHSLGIT 292
FR L+E RV+ + LG T
Sbjct: 318 FRALEENLKIDRRVTRFVLPLGAT 341
>UniRef50_A1G7D6 Cluster: Major facilitator superfamily MFS_1; n=2;
Micromonosporaceae|Rep: Major facilitator superfamily
MFS_1 - Salinispora arenicola CNS205
Length = 565
Score = 32.7 bits (71), Expect = 3.4
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 194 SSGLVLPLTFRVLDELDPRQHR--VSVVIHSLG 286
S+G +LPL F ++ EL PR+HR V+V + S+G
Sbjct: 226 SAGGLLPLVFTLVAELTPRRHRGWVAVTVGSIG 258
>UniRef50_A7RFU2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 407
Score = 32.7 bits (71), Expect = 3.4
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 32 WFTCA-FFSCLCVLLIDQNLLNLVKFYYPFCFCT*LLYLSLRIA-MPRMIGIFATQSSGL 205
WF A F+ + + QN NL++ Y+P + + IA P +I +F +S
Sbjct: 245 WFKSADFYVMMVIYFTTQNTTNLIQTYFPIYLTETMHFPKEAIAYFPLLILVFGIIASAA 304
Query: 206 VLPLT 220
V PLT
Sbjct: 305 VKPLT 309
>UniRef50_Q4J944 Cluster: Conserved protein; n=1; Sulfolobus
acidocaldarius|Rep: Conserved protein - Sulfolobus
acidocaldarius
Length = 352
Score = 31.9 bits (69), Expect = 5.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 194 SSGLVLPLTFRVLDELDPRQHRVSVVIHSLGITY 295
+ L+L +V DEL+P RV + I SLGIT+
Sbjct: 299 TKALILDSHGKVTDELEPEFDRVKIPIRSLGITF 332
>UniRef50_A5Z8P0 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 447
Score = 31.5 bits (68), Expect = 7.8
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +2
Query: 56 CLCVLLIDQNLLNLVKFYYPFCFCT*LLYLSLRIAMPRMIGIFATQSSGLVLPLTFRVLD 235
C +ID L+N V F + + + +P I F+TQSS LP+ +L
Sbjct: 248 CFIAFIIDSYLINAVLLKV-FAKVNPIKFF--KKILPAQIVAFSTQSSAGTLPVATEILT 304
Query: 236 ELDPRQHRVSVVIHSLGITYRIGHDSHSSLWP 331
+ +V+ V LG T IG + +WP
Sbjct: 305 DKIGVSGKVANVTTPLGTT--IGMPGCAGIWP 334
>UniRef50_Q8SRD5 Cluster: DNA primase; n=1; Encephalitozoon
cuniculi|Rep: DNA primase - Encephalitozoon cuniculi
Length = 298
Score = 31.5 bits (68), Expect = 7.8
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +2
Query: 95 LVKFYYPFCFCT*LLYLSLRIAMPRMIGIFATQSSGLVLPLTFRVLDELDPRQHRVSVVI 274
L++ YY F L++ LRI R I F S G + LTFR DE + ++
Sbjct: 24 LMRTYYRTLFPLDLMFRCLRIDESREIS-FGLGSGGYIRFLTFRTADEFRKKLMGIAPDK 82
Query: 275 HSLGITYRIGHDSHS 319
+G YR HS
Sbjct: 83 IDVGAIYRDRPTKHS 97
>UniRef50_Q7MWN8 Cluster: Uncharacterized transporter PG_0562; n=9;
Bacteroidales|Rep: Uncharacterized transporter PG_0562 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 558
Score = 31.5 bits (68), Expect = 7.8
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +2
Query: 44 AFFSCLCVLLIDQNLLNLVKFYYPFCFCT*LLYLSLRIAMPRMIGIFATQSSGL-VLPLT 220
+FF L I QNL++L F C LLY L I+MP ++GI A ++ L
Sbjct: 90 SFFPSLKKGGIAQNLISLGLVLLTFLLCI-LLYYILGISMPNLMGIVAGATTNTPALGAA 148
Query: 221 FRVLDELDP-RQHRVSVVIHSLGITYRIG 304
L +++P ++ + + +TY +G
Sbjct: 149 QTTLHQINPDATAEMAEMALACAVTYPLG 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,252,798
Number of Sequences: 1657284
Number of extensions: 7082743
Number of successful extensions: 15778
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15771
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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