Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L19
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    29   0.029
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   5.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.8  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 28.7 bits (61), Expect = 0.029
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 188 TQSSGLVLPLTFRVLDELDPRQHRVSVVIHSLGIT 292
           T SS   LP+TFR L+E +    RV+  + ++G T
Sbjct: 360 TASSAATLPITFRCLEENNKIDSRVTRFVVAVGAT 394


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 342 PARVHLNYILCSLITESDPRDP 407
           P    LN  L SLIT S+ R P
Sbjct: 491 PPPYRLNKPLMSLITSSEVRQP 512


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 359 KMNTCGTNDQAIAKSESHVL 300
           + N  G ND+ IA+  +H L
Sbjct: 97  RRNIFGENDELIAEKVAHAL 116


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 173 IGIFATQSSGLVLPLTFRVLDELDP 247
           +G+FA   S LV  +  RV    DP
Sbjct: 757 LGVFACNRSELVEAILKRVQTPFDP 781


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,800
Number of Sequences: 438
Number of extensions: 2002
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)