Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L18
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 70 1e-12
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 70 1e-12
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 60 9e-10
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 58 6e-09
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 49 3e-06
07_01_0935 + 7905748-7905765,7906071-7906096,7906142-7906166,790... 35 0.049
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 33 0.11
11_01_0605 + 4821363-4823246 30 1.4
04_04_0590 + 26457514-26457801,26458849-26459325,26459817-264600... 30 1.4
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 29 1.8
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 29 2.4
11_01_0606 + 4831102-4833033 29 3.2
03_01_0110 - 865605-866004,866094-866712,867659-867863 29 3.2
06_01_1186 - 10195175-10195621,10195882-10195930,10196019-101961... 28 5.6
06_01_1076 - 8778210-8778734 28 5.6
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 28 5.6
07_03_0344 - 16976854-16977186,16978920-16979000 27 7.4
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563... 27 7.4
01_01_0174 - 1496543-1496596,1496686-1498131,1498928-1499341 27 7.4
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 27 9.8
03_03_0184 + 15228045-15228405,15228725-15228883,15228984-152292... 27 9.8
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 70.1 bits (164), Expect = 1e-12
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Frame = +2
Query: 50 VGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNL-- 223
VG++G+G +G A L A+ G V L D ++ A+ I L+ L G L
Sbjct: 13 VGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCE 72
Query: 224 NADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXX 403
++ EQ +CV +L +DA V E + E+ ++KKK+F LD + + I
Sbjct: 73 HSIEQIKCVSSVQEL----RDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSI 128
Query: 404 XXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTR 544
QVI H NPP + L+EI+ T EV K +
Sbjct: 129 SITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVK 175
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 69.7 bits (163), Expect = 1e-12
Identities = 46/164 (28%), Positives = 75/164 (45%)
Frame = +2
Query: 38 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 217
K KV I+G GL+G A Y V L +V EK + I IK L++ + G +
Sbjct: 313 KVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTE 372
Query: 218 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXX 397
++ V G D KD V E V EN++LK+++F +L+ + +
Sbjct: 373 E-RYEKAMSLVTGVLDYE-RFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTS 430
Query: 398 XXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEV 529
E + K +++ +H +P + +PL+EIV T P+V
Sbjct: 431 TIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQV 474
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 60.5 bits (140), Expect = 9e-10
Identities = 43/161 (26%), Positives = 74/161 (45%)
Frame = +2
Query: 47 KVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLN 226
KV IVG GL+G A S V L +V E+ + I+ +K L++L K G + +
Sbjct: 313 KVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKE-D 371
Query: 227 ADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXX 406
+ + + G D ++A V E V E+L LK+K+F +L+ N I
Sbjct: 372 YENKLSLLSGVLDYE-QFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILATNTSTID 430
Query: 407 XXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEV 529
+ + ++ +H +P + +PL+EI+ T +V
Sbjct: 431 LHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQV 471
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 57.6 bits (133), Expect = 6e-09
Identities = 43/163 (26%), Positives = 70/163 (42%)
Frame = +2
Query: 38 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 217
K KV ++G GL+G A V L +V + + I L+ L K G L
Sbjct: 308 KIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTK 367
Query: 218 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXX 397
+ ++ +KG D + KD V E V E + LK+ +F +L+ V + I
Sbjct: 368 D-KMNKAMSLLKGALDYS-DFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTS 425
Query: 398 XXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPE 526
E + ++I +H +P + +PL+EIV T P+
Sbjct: 426 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQ 468
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 48.8 bits (111), Expect = 3e-06
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Frame = +2
Query: 38 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 217
K KV IVG GL+G A Y V L +V +K + I IK L++ ++G +
Sbjct: 309 KVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTK 368
Query: 218 NLNADEQFQCVKGTCD------LAIAVKDA---------IFVQE---CVPENLELKKKVF 343
+ ++ + G D + + ++++ F+++ V EN+++K++VF
Sbjct: 369 EIY-EKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQVF 427
Query: 344 QNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKP 523
+L+ + + E + ++ +H +P + +PL+EIV + T P
Sbjct: 428 ADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSP 487
Query: 524 EV 529
+V
Sbjct: 488 QV 489
>07_01_0935 +
7905748-7905765,7906071-7906096,7906142-7906166,
7906891-7907700,7907803-7907934,7908102-7908470,
7908540-7908671,7909135-7909662
Length = 679
Score = 34.7 bits (76), Expect = 0.049
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = -3
Query: 327 SSKFSGTHSCTKIASLTAIAK-SQVPFTHWNCSSAFRFP-LRSPSFSKVFNCTLISAIAS 154
+S FSG + T +S + +A Q+P + W+ P R FS ++ I
Sbjct: 432 TSTFSGRVTATAWSSTSDLALLRQIPLSVWSSYDYCLLPDQRCSDFSHYLYFNVVGLITR 491
Query: 153 VICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFS 43
C T+ ++W+ + N + D PT TFS
Sbjct: 492 HDCERTSGYAISWWSSYGNCLVLDKRCGVPPTTSTFS 528
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 168 SAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNL 31
S + S+I ST + ++W N ++ DLP+ T P S LNL
Sbjct: 355 SFVGSLILPSTVNQNLSWLDASYNRLSGDLPVDINITFPNLSYLNL 400
>11_01_0605 + 4821363-4823246
Length = 627
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 375 VLSSTTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 253
+LSS +K WNT ++SG H C+ +AS + + +P
Sbjct: 51 ILSSVGSTKNWNTCSNPCQWSGVH-CSSVASSAFVTRLSLP 90
>04_04_0590 +
26457514-26457801,26458849-26459325,26459817-26460027,
26460219-26460376,26460461-26460531,26460707-26460812,
26460880-26460966,26461591-26462148,26462245-26462308,
26463352-26463485,26463568-26463621,26464321-26464417,
26465620-26465825,26465901-26465984,26466265-26466330,
26466883-26466956,26467664-26467751,26467830-26467928
Length = 973
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 151 NLLLNNIEQSYLVSD*SEQHSP*SPDQSTPNNSNFFRFKLGSHDDT 14
N+ L N+ + +L SD + + +NSN FR+ GS DDT
Sbjct: 761 NMSLRNLAEKFLTSDPDKMMI--LKENGFSSNSNSFRYSGGSRDDT 804
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 47 KVGIVGSGLIGRSWAMLFASVGYQ-VTLFD 133
++GIVG+G G S A A +GY+ VTLF+
Sbjct: 23 RIGIVGAGPSGLSAAYALAKLGYRNVTLFE 52
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 282 LTAIAKSQVPFTHWNCSSAFRFPLRSPSFSKVFN 181
+ +A S++ HW+ A FP+ PS+ K++N
Sbjct: 188 IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWN 221
>11_01_0606 + 4831102-4833033
Length = 643
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 363 TTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 253
++L+K WNT ++SG H CT AS + + + +P
Sbjct: 61 SSLTKSWNTSSNPCEWSGVH-CTSAASSSFVTRLSLP 96
>03_01_0110 - 865605-866004,866094-866712,867659-867863
Length = 407
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 461 PVNPPYYVPL---VEIVPAPWTKPE 526
PV PP Y+ L ++VP PW +PE
Sbjct: 317 PVKPPTYLRLNSKAQLVPNPWRQPE 341
>06_01_1186 -
10195175-10195621,10195882-10195930,10196019-10196168,
10196513-10196658,10196877-10196914,10197000-10197216,
10197393-10197611,10197753-10197879,10198631-10198812,
10198928-10199131,10199773-10199782,10200789-10200815,
10201072-10201132,10201731-10201851
Length = 665
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 122 TLFDVVEKQITDAIADIKVQ-LKTLEKDGLLRGNLNADEQFQCVKGTCDLAIAVKDAIFV 298
+LFD K++TD +I+V ++ L+K L N + E + +K CD + ++ + V
Sbjct: 348 SLFDEFLKRLTDRAVEIRVSVIEHLKK--CLMSNHSRPEAQEIIKALCDRLLDYEENVSV 405
Query: 299 QECVPENL 322
+ E L
Sbjct: 406 KCYTMERL 413
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 461 PVNPPYYVPL---VEIVPAPWTKPE 526
PV PP Y+ L ++VP PW +PE
Sbjct: 115 PVKPPTYLRLNSKPQLVPNPWRQPE 139
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 243 WNCSSAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSN 127
+ CSS R P R PS+S + ++ S CF+TTS+
Sbjct: 586 YTCSSVIRTPRRVPSWSCISRENSTGSL-SEDCFATTSS 623
>07_03_0344 - 16976854-16977186,16978920-16979000
Length = 137
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +2
Query: 422 ENMKHKAQV--IVSHPVNPPYYVPLVEIVPA 508
+ +K+KA + +V+HP NP + P ++++PA
Sbjct: 22 KTLKYKAVLDYLVAHPPNPVFVGPRLDVMPA 52
>04_04_0579 -
26355431-26355684,26355988-26356073,26356292-26356377,
26356596-26356788,26356895-26357094,26359257-26359379
Length = 313
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 252 FTHWNCSSAF-RFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTWYP 109
F ++ C S + R PL + +N +S ++S+ ++ V WYP
Sbjct: 155 FQYFECDSPYERMPLADKVYELCYNFPPLSYLSSIELSPSSWMSVFWYP 203
>01_01_0174 - 1496543-1496596,1496686-1498131,1498928-1499341
Length = 637
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 189 VFNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLP 61
+ NC S I S IC + ++ W + N+ + P PLP
Sbjct: 42 ILNCKSDSLIPSYICSVISKSRWGWASDDPNDDEYTPPDHPLP 84
>05_05_0195 +
23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 326 VPNFPGRILVRKSHP*RQSLNHRYLSHIGTVHPHLDFPLGVH 201
+ NF G +V+ S + LN + H+G++H +L+ + VH
Sbjct: 349 INNF-GSSVVKFSRS-QAKLNSEIVKHLGSIHEYLEMMISVH 388
>03_03_0184 +
15228045-15228405,15228725-15228883,15228984-15229258,
15229346-15229594,15229670-15229788,15229874-15229972,
15230068-15230176,15230281-15230421
Length = 503
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 40 IGKSWNCWEWTDREIMGYVVRFSRIPSNFVR 132
I SW W D E+ GYVV + + VR
Sbjct: 444 INSSWRPWYSDDNEVAGYVVGYKGLVFATVR 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,137,095
Number of Sequences: 37544
Number of extensions: 275871
Number of successful extensions: 813
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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