Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L17
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 52 4e-07
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 52 4e-07
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 3.9
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 28 5.1
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 6.7
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 113 bits (271), Expect = 1e-25
Identities = 59/181 (32%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Frame = +3
Query: 3 QHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTN-PGAEKRMFQVKGKRNVRVRQV 179
QHRE +ES FL YF ++Y+ GG SG+ HV + +F KGKRNVR +V
Sbjct: 92 QHREIQNYESPLFLSYFPDGIRYVSGGYESGYRHVDDQFKNWKPHLFHCKGKRNVRCTEV 151
Query: 180 DPLISSMNKGDCFILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIIDQ 359
+ ++S+N GD FILD+ D+YV++ + +E++K ++ A I D + G +V I+D
Sbjct: 152 ECEVNSLNLGDVFILDLGKDLYVWMPPESGRLERIKGMARAKNIADHERMGIPKVHILDD 211
Query: 360 YSNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKVKATALA 539
E D F + G + DD + + + ++L +VSD+SG K + ++
Sbjct: 212 V--EWDNDSTFWSYFGGVSSVRKVSKGKDDDDNYWKRLTEQITLWKVSDASGAAKVSMVS 269
Query: 540 K 542
+
Sbjct: 270 Q 270
Score = 32.7 bits (71), Expect = 0.18
Identities = 29/110 (26%), Positives = 45/110 (40%)
Frame = +3
Query: 27 ESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAEKRMFQVKGKRNVRVRQVDPLISSMNK 206
ES F Q+F ++D + F ++ E + V+ N +D
Sbjct: 337 ESTQFTQWFRD---WVDEKKKNTFTPLLFQVSDESGLLHVEEIANFTQEDLDG------- 386
Query: 207 GDCFILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIID 356
D ILD N IYV+VG EK +A++ A ++D R + ID
Sbjct: 387 DDVMILDALNSIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAID 436
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 9 REAMGHESNHFLQYFTSALQYLDGGNP-SGFNHVVTNPGAEKRMFQ--VKGKRNVRVRQV 179
RE M E+ FL F + Y++GG SGF + P R+++ V G V + V
Sbjct: 589 REEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTTEKPAHLTRLYRAGVNGTA-VEMEPV 646
Query: 180 DPLISSMNKGDCFILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIIDQ 359
+ S++ CF+LD I+++ G +++ KA A ++ +D G+ +E Q
Sbjct: 647 PLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSEIETCRQ 706
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 216 FILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIIDQY-SNEVDTQKFF 392
F+LD N+DI++++G++ + K+ + ++ H R + Y E + F
Sbjct: 776 FVLDSNSDIFLWIGKKANRLLKMAGQKLVVEL----HQMIDRPDYAQVYRETEGEESMMF 831
Query: 393 TALGSGTRDIVP 428
+ +G +IVP
Sbjct: 832 RSKFAGWDEIVP 843
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 9 REAMGHESNHFLQYFTSALQYLDGGNP-SGFNHVVTNPGAEKRMFQ--VKGKRNVRVRQV 179
RE M E+ FL F + Y++GG SGF + P R+++ V G V + V
Sbjct: 589 REEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTTEKPAHLTRLYRAGVNGTA-VEMEPV 646
Query: 180 DPLISSMNKGDCFILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIIDQ 359
+ S++ CF+LD I+++ G +++ KA A ++ +D G+ +E Q
Sbjct: 647 PLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSEIETCRQ 706
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 216 FILDINNDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVEIIDQY-SNEVDTQKFF 392
F+LD N+DI++++G++ + K+ + ++ H R + Y E + F
Sbjct: 776 FVLDSNSDIFLWIGKKANRLLKMAGQKLVVEL----HQMIDRPDYAQVYRETEGEESMMF 831
Query: 393 TALGSGTRDIVP 428
+ +G +IVP
Sbjct: 832 RSKFAGWDEIVP 843
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 114 NPGAEKRMFQVKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVGERTKNVEKLKAI 293
+P + + QV+G +NV VR V P +SS+++ CF++ + Y G + +EK KA
Sbjct: 214 SPYPDVMLIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKAS 273
Query: 294 SMANQI 311
+ +I
Sbjct: 274 QLCIEI 279
>U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical
protein C56C10.10 protein.
Length = 342
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 197 GRYQWVYLSHSNIPLAFNLEHTFLGTRIRHDVVET 93
G +WV L NIPL N+ +L H+ ET
Sbjct: 231 GEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 265
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 417 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKVK 524
++ P ES G D+ F R + +TVSL+ D + ++
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQ 875
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 417 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKVK 524
++ P ES G D+ F R + +TVSL+ D + ++
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQ 875
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 417 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKVK 524
++ P ES G D+ F R + +TVSL+ D + ++
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQ 875
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 TKNVEKLKAISMAN--QIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPEES 437
T N++ + A++ N DQ + R V++ + +V + S T+ + EE
Sbjct: 368 TNNLQLVLALTKLNFALTTDQKIDERAHVQLAVDATQQVLEKYTLLTFDSATKGQL-EEV 426
Query: 438 AGGDDQAFERNEEQTVSL 491
+D+ FER+EE+ V++
Sbjct: 427 QVENDEVFERSEEEVVTI 444
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 279 KLKAISMANQIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPE 431
KLK S A +I +++ + V+II+Q+S QK F+ L I+PE
Sbjct: 2 KLKINSEAPKIDNENDAFQKIVDIINQFSASEIAQKKFSFLSPRILSIMPE 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,172,046
Number of Sequences: 27780
Number of extensions: 290160
Number of successful extensions: 799
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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