Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L16
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    26   0.27 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    26   0.27 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   4.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/51 (23%), Positives = 18/51 (35%)
 Frame = -2

Query: 309 YHRGLRSKCRRSCHPDELPGGCRHLSSGVLPLITTSMDDQLYRADSCSDGV 157
           YHR        SC          H  + V P++       L + D+C  G+
Sbjct: 46  YHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLSQYDTCQQGI 96


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/51 (23%), Positives = 18/51 (35%)
 Frame = -2

Query: 309 YHRGLRSKCRRSCHPDELPGGCRHLSSGVLPLITTSMDDQLYRADSCSDGV 157
           YHR        SC          H  + V P++       L + D+C  G+
Sbjct: 46  YHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLSQYDTCQQGI 96


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/51 (21%), Positives = 17/51 (33%)
 Frame = -2

Query: 309 YHRGLRSKCRRSCHPDELPGGCRHLSSGVLPLITTSMDDQLYRADSCSDGV 157
           YH         SC          H  + V P++       L + D+C  G+
Sbjct: 46  YHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLSQYDTCQQGI 96


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 372 KELDRQTVSYPWTAPKDLEGDVVFKVTIVKSYAV 473
           K +  Q +  PWTAP+ ++     K  I K Y++
Sbjct: 450 KNMPSQYIHEPWTAPEQVQR--AAKCIIGKDYSL 481


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 453 IVKSYAVFWVGIESAPVKVLSH*IMSVIITYLMSTLICITN 575
           ++ S+  FW+   + P +V     + V     M+TL+  TN
Sbjct: 82  VIISWVSFWLNRNATPARV----ALGVTTVLTMTTLMSSTN 118


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 285 CRRSCHPDELPGGCRH 238
           C R C  D +P  CR+
Sbjct: 44  CARKCVKDSVPMTCRY 59


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 369 HASCGSRRYLVH 334
           HA+CG++  L+H
Sbjct: 357 HATCGTKNALLH 368


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 282 GTWTVSPDDTFSQ 320
           G W  SPD+ F Q
Sbjct: 74  GQWNYSPDNHFEQ 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,975
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)