Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L16
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens ...    46   7e-05
AK095774-1|BAC04625.1|  196|Homo sapiens protein ( Homo sapiens ...    30   5.2  

>AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16275 fis, clone NT2RI2027157, moderately
           similar to Mouse SDR2 mRNA. ).
          Length = 626

 Score = 46.4 bits (105), Expect = 7e-05
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
 Frame = +3

Query: 243 GILLEARQGDKI----VGTWTVSPDDTFSQPLNCGE-PNNAVTHKMHAKELDRQTVSYPW 407
           G LLEAR  + +    +G++T+  D   SQ L C +   +AV+H+  +K+ +   +   W
Sbjct: 75  GFLLEARNAEDLNGPPIGSFTLI-DSEVSQLLTCEDIQGSAVSHRSASKKTE---IKVYW 130

Query: 408 TAPKDLEGDVVFKVTIVKSYAVFWVGI 488
            AP        F VT+V+ Y ++WV I
Sbjct: 131 NAPSSAPNHTQFLVTVVEKYKIYWVKI 157


>AK095774-1|BAC04625.1|  196|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38455 fis, clone FEBRA2019711. ).
          Length = 196

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 282 RRSCHPDELPGGCRHLSSGVLPLITTSMDDQLYRA 178
           RR CH    PG  R    G+ PL T S  + L RA
Sbjct: 61  RRGCHHPLAPGQPRRTGKGLRPLPTQSQSELLLRA 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,911,835
Number of Sequences: 237096
Number of extensions: 2328031
Number of successful extensions: 5814
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5814
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)