Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L10
         (183 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module contain...    28   4.7  
BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module contain...    28   4.7  
BC053933-1|AAH53933.1|  239|Homo sapiens EMR2 protein protein.         28   4.7  
BC034949-1|AAH34949.1|  239|Homo sapiens EMR2 protein protein.         28   4.7  
AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module contain...    28   4.7  
AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2 pr...    28   4.7  
AC005327-1|AAC27673.1|  287|Homo sapiens CD97_HUMAN, partial CDS...    28   4.7  
AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane hel...    28   4.7  

>BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC053933-1|AAH53933.1|  239|Homo sapiens EMR2 protein protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC034949-1|AAH34949.1|  239|Homo sapiens EMR2 protein protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like sequence 2
           isofor protein.
          Length = 810

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2
           protein.
          Length = 823

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 12  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AC005327-1|AAC27673.1|  287|Homo sapiens CD97_HUMAN, partial CDS
           protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 9   FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 49


>AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 20  FAVW---HGCETE-SRGGQ*WCPSDGNSDHVVIANPDPFFS 130
           F VW    G ET+ SRG   WCP D +  +      +P FS
Sbjct: 13  FCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCNPGFS 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,288,659
Number of Sequences: 237096
Number of extensions: 606313
Number of successful extensions: 1101
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 76,859,062
effective HSP length: 40
effective length of database: 67,375,222
effective search space used: 1347504440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)