Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L10
(183 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 28 0.76
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 0.76
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 28 0.76
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 27 2.3
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 3.1
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 4.1
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 25 5.4
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 25 5.4
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 25 5.4
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 25 5.4
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z66494-7|CAA91261.1| 445|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical pr... 25 9.4
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 25 9.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 25 9.4
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.3 bits (60), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 105 ITTWSLLPSDGHHY--CPPRDSVSQPCHTA 22
+ TW S+GH + C ++ VS+PC TA
Sbjct: 447 LNTWVQCASEGHDHLRCCLQEEVSKPCQTA 476
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 105 ITTWSLLPSDGHHY--CPPRDSVSQPCHTA 22
+ TW S+GH + C ++ VS+PC TA
Sbjct: 268 LNTWVQCASEGHDHLRCCLQEEVSKPCQTA 297
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.3 bits (60), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 105 ITTWSLLPSDGHHY--CPPRDSVSQPCHTA 22
+ TW S+GH + C ++ VS+PC TA
Sbjct: 447 LNTWVQCASEGHDHLRCCLQEEVSKPCQTA 476
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 4 AFVFLLRRMAWLRNRVTWWTIVVSI 78
A++ +L + W RN+V+WW V I
Sbjct: 370 AYITILTAL-WTRNKVSWWYTVAYI 393
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 83 GNSDHVVIANPDPFFSQPSNGPSG 154
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 83 GNSDHVVIANPDPFFSQPSNGPSG 154
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 68 WCP--SDGNSDHVVIANPDPFFSQPSNGPS 151
WC +D N+++ I+ P FF P NG S
Sbjct: 359 WCKIIADANANNS-ISEPSDFFGPPKNGAS 387
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 68 WCP--SDGNSDHVVIANPDPFFSQPSNGPS 151
WC +D N+++ I+ P FF P NG S
Sbjct: 377 WCKIIADANANNS-ISEPSDFFGPPKNGAS 405
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 15 SSSPYGMAAKQSHVVDNSGVHRTAI 89
S+ P+G + ++ SGVHRT I
Sbjct: 257 SNDPFGYSNSVPYLFKKSGVHRTVI 281
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 113 PDPFFSQPSNGPSGNYEP 166
P PF S P P G Y+P
Sbjct: 219 PPPFASAPQTAPRGAYDP 236
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 113 PDPFFSQPSNGPSGNYEP 166
P PF S P P G Y+P
Sbjct: 219 PPPFASAPQTAPRGAYDP 236
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 89 SDHVVIANPDP 121
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 89 SDHVVIANPDP 121
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>Z66494-7|CAA91261.1| 445|Caenorhabditis elegans Hypothetical
protein C34C6.7 protein.
Length = 445
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 13 FLLRRMAWLRNRVTWWTIVV 72
FLL + VTWWTIV+
Sbjct: 343 FLLLLSPYEEGEVTWWTIVL 362
>Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical
protein W10D5.3g protein.
Length = 695
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 QPSNGPSGNYEPQ 169
Q SN P+GNYEP+
Sbjct: 84 QASNFPNGNYEPK 96
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -3
Query: 76 WTP--LLSTT*LCFAAMPYG 23
WTP LL + CFAA P+G
Sbjct: 79 WTPKILLVISSFCFAAFPFG 98
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 116 DPFFSQPSNGPSGNYEP 166
DP +QPS GP G + P
Sbjct: 306 DPSGAQPSGGPPGPFNP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,787,075
Number of Sequences: 27780
Number of extensions: 82478
Number of successful extensions: 220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 12,740,198
effective HSP length: 41
effective length of database: 11,601,218
effective search space used: 220423142
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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