Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L10
         (183 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    18   9.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    18   9.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 100 CYCEPGSF 123
           C C+PG F
Sbjct: 296 CRCDPGYF 303


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 143  RLMVERRKDPGSQ*QRGH 90
            R ++ER + P  Q   GH
Sbjct: 1914 RKLIERNEAPSRQTGSGH 1931


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -1

Query: 69  HYCPPRDSVSQPCHTAKKK 13
           H  PP    S PC   + K
Sbjct: 579 HPEPPESVCSLPCEVGQAK 597


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,280
Number of Sequences: 438
Number of extensions: 1000
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)