Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L06
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.1  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 112 LQIEEVNNLTLDKLFLKLCKGCQLRSMASIPPSAFSAGHIRETQR 246
           L++ +VN+    K F   CK C   ++  +     S  HIRE +R
Sbjct: 188 LRVPKVNSHGKIKTFK--CKQCDFVAITKLEQWNHSKVHIREDKR 230


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 286 NEPAKFFNTTYMELSPLKYNSKLMNSIWGLYNRYSP 393
           NE   F   + + +  L   S+ + +IWGL   Y+P
Sbjct: 241 NEKEIFERLSALPVDKLLQISEKVANIWGLKKVYAP 276


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 286 NEPAKFFNTTYMELSPLKYNSKLMNSIWGLYNRYSP 393
           NE   F   + + +  L   S+ + +IWGL   Y+P
Sbjct: 241 NEKEIFERLSVLPVDKLLQISEEVANIWGLKKVYAP 276


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 FKNCYNIMYIT*LIF 610
           F+N YNI+Y + ++F
Sbjct: 328 FENYYNILYFSRIMF 342


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 286 NEPAKFFNTTYMELSPLKYNSKLMNSIWGLYNRYSP 393
           NE   F   + + +  L   S+ + +IWGL   Y+P
Sbjct: 243 NEKEIFERLSALPVDKLLQISEEVANIWGLKKVYAP 278


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 158 SSCVKVVN*GVWLRF 202
           + CV++   GVWL+F
Sbjct: 752 TGCVRIKITGVWLKF 766


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,276
Number of Sequences: 336
Number of extensions: 3280
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)