Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L06
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB014575-1|BAA31650.2| 1217|Homo sapiens KIAA0675 protein protein.     35   0.19 
BC063882-1|AAH63882.1| 1208|Homo sapiens zinc finger DAZ interac...    33   0.79 
BC056674-1|AAH56674.1|  492|Homo sapiens DZIP3 protein protein.        33   0.79 
BC039018-1|AAH39018.1|  671|Homo sapiens Similar to KIAA0675 gen...    33   0.79 
AY227654-1|AAO72970.1|  303|Homo sapiens RNA-binding RING-H2 pro...    33   0.79 
AY227651-1|AAO72967.1|  666|Homo sapiens RNA-binding RING-H2 pro...    33   0.79 

>AB014575-1|BAA31650.2| 1217|Homo sapiens KIAA0675 protein protein.
          Length = 1217

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +1

Query: 181 LRSMASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKL 354
           L SM S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL
Sbjct: 7   LCSMDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKL 66

Query: 355 MNSIWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           +N+I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 67  LNAINTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 109


>BC063882-1|AAH63882.1| 1208|Homo sapiens zinc finger DAZ
           interacting protein 3 protein.
          Length = 1208

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 MASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKLMNS 363
           M S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL+N+
Sbjct: 1   MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNA 60

Query: 364 IWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 61  INTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 100


>BC056674-1|AAH56674.1|  492|Homo sapiens DZIP3 protein protein.
          Length = 492

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 MASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKLMNS 363
           M S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL+N+
Sbjct: 1   MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNA 60

Query: 364 IWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 61  INTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 100


>BC039018-1|AAH39018.1|  671|Homo sapiens Similar to KIAA0675 gene
           product protein.
          Length = 671

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 MASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKLMNS 363
           M S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL+N+
Sbjct: 1   MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNA 60

Query: 364 IWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 61  INTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 100


>AY227654-1|AAO72970.1|  303|Homo sapiens RNA-binding RING-H2
           protein-ubiquitin ligase short isoform protein.
          Length = 303

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 MASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKLMNS 363
           M S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL+N+
Sbjct: 1   MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNA 60

Query: 364 IWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 61  INTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 100


>AY227651-1|AAO72967.1|  666|Homo sapiens RNA-binding RING-H2
           protein-ubiquitin ligase protein.
          Length = 666

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 MASIPPSAFSAGHIRETQRNAR-DMKLSKTS-KGNEPAKFFNTTYMELSPLKYNSKLMNS 363
           M S+P   F      E QR    + KL K+S + N+      T  + ++ L    KL+N+
Sbjct: 1   MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNA 60

Query: 364 IWGLYNRYSPHNVKKVNDAFAFHGELQQSAANSTKTEPVI 483
           I  L     PH  K + + F+F    ++ AANS   E ++
Sbjct: 61  INTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIV 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,394,105
Number of Sequences: 237096
Number of extensions: 1837058
Number of successful extensions: 3254
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3254
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)