Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L06
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.77 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   7.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   7.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 442  QQSAANSTKTEPVITLSSAKLDNVWATMNVS 534
            Q SA N   T  V+T S    DN+ AT  ++
Sbjct: 993  QTSANNDKDTNAVVTQSKEARDNITATKQLN 1023


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 100 NISGLQIEEVNNLTLDKLFLKLCKGCQLRSMAS 198
           N   L+ EE+     ++   +LC+GC L  M S
Sbjct: 249 NNGNLEREELEQFAENEDLEELCRGCNLGHMIS 281


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 458 LAADCCNSPWNAKASLT 408
           + A CCNSP N   S++
Sbjct: 159 IPASCCNSPENNTCSIS 175


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 296 AGSLPLLVLDSFMSRAL 246
           A  +P+LV+ SFM R +
Sbjct: 107 AFEMPMLVISSFMERMI 123


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 296 AGSLPLLVLDSFMSRALR*VSRMCPAENADGGIEAILLS 180
           AG    L+  SF S  L  + R    +   GG+E  LLS
Sbjct: 16  AGRPSNLLRTSFSSAKLEKLYRASSLQQRRGGLEYFLLS 54


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 296 AGSLPLLVLDSFMSRAL 246
           A  +P+LV+ SFM R +
Sbjct: 107 AFEMPMLVISSFMERMI 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,538
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)