Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L03
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 134 6e-32
BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p pro... 124 6e-29
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 124 6e-29
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein. 121 6e-28
AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p pro... 121 6e-28
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 103 2e-22
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 28 9.7
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 28 9.7
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 134 bits (325), Expect = 6e-32
Identities = 63/147 (42%), Positives = 91/147 (61%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLKSLSIPRLELCGALLGARLSDKITSSLRLK 182
YGA Y+R + V LL +K +VAP+K++S+PRLELCGALL + ++ I +
Sbjct: 1055 YGAAIYVRGEV-GSAIMVQLLTAKTRVAPVKTVSLPRLELCGALLLSEMAAAIIPQMPTI 1113
Query: 183 LHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRS 362
+ WTDSTIVL WL+ P + TFV NR +I TKT +W +V + NP+D +R
Sbjct: 1114 NSKLYCWTDSTIVLAWLSKPACQWTTFVANRETKIAQATKTENWSHVQSEHNPADLASRG 1173
Query: 363 LNAEDLFHCQLWWKGPEFLKNNKSSWP 443
++ +DL QLWW GP +L+N ++ WP
Sbjct: 1174 VSLQDLADSQLWWHGPTWLQNPRNQWP 1200
>BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p
protein.
Length = 733
Score = 124 bits (300), Expect = 6e-29
Identities = 60/147 (40%), Positives = 86/147 (58%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLKSLSIPRLELCGALLGARLSDKITSSLRLK 182
YGA Y+R V +++ LL +K +VAP+K++S+PRLELCGA+L + I +
Sbjct: 63 YGAAIYIR-VEMGQKILTRLLTAKTRVAPVKTVSLPRLELCGAVLLTEMVTAILPHMPSA 121
Query: 183 LHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRS 362
D WTDSTIVL WL P TFV NRVA+I T + W +V + N +D +R
Sbjct: 122 SSDIRCWTDSTIVLAWLRKPACNWTTFVANRVAKITQATPVDCWAHVRSEQNSADLASRG 181
Query: 363 LNAEDLFHCQLWWKGPEFLKNNKSSWP 443
++ ++L LWW GPE+L+ + WP
Sbjct: 182 VSLQELAENHLWWHGPEWLQGPRELWP 208
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 124 bits (300), Expect = 6e-29
Identities = 60/147 (40%), Positives = 86/147 (58%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLKSLSIPRLELCGALLGARLSDKITSSLRLK 182
YGA Y+R V +++ LL +K +VAP+K++S+PRLELCGA+L + I +
Sbjct: 1160 YGAAIYIR-VEMGQKILTRLLTAKTRVAPVKTVSLPRLELCGAVLLTEMVTAILPHMPSA 1218
Query: 183 LHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRS 362
D WTDSTIVL WL P TFV NRVA+I T + W +V + N +D +R
Sbjct: 1219 SSDIRCWTDSTIVLAWLRKPACNWTTFVANRVAKITQATPVDCWAHVRSEQNSADLASRG 1278
Query: 363 LNAEDLFHCQLWWKGPEFLKNNKSSWP 443
++ ++L LWW GPE+L+ + WP
Sbjct: 1279 VSLQELAENHLWWHGPEWLQGPRELWP 1305
>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
Length = 1607
Score = 121 bits (292), Expect = 6e-28
Identities = 63/147 (42%), Positives = 83/147 (56%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLKSLSIPRLELCGALLGARLSDKITSSLRLK 182
YGA Y R V L+ +K +VAP+K +SIPRLEL ALL +RL + +SL +
Sbjct: 935 YGAVVYARVAVGCS-FQVTLVAAKTRVAPIKPVSIPRLELNAALLLSRLLSIVKTSLTIP 993
Query: 183 LHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRS 362
L WTDS IVL WL+ P + T+V NR +EI S + W +V T NP+D +R
Sbjct: 994 LFSTSCWTDSEIVLHWLSAPPRRWNTYVCNRTSEILSDFPRSCWNHVRTEDNPADCASRG 1053
Query: 363 LNAEDLFHCQLWWKGPEFLKNNKSSWP 443
L+ L +LWWKGP +L S WP
Sbjct: 1054 LHPSKLLEHRLWWKGPSWLATPTSEWP 1080
>AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p
protein.
Length = 1015
Score = 121 bits (292), Expect = 6e-28
Identities = 63/147 (42%), Positives = 83/147 (56%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLKSLSIPRLELCGALLGARLSDKITSSLRLK 182
YGA Y R V L+ +K +VAP+K +SIPRLEL ALL +RL + +SL +
Sbjct: 343 YGAVVYARVAVGCS-FQVTLVAAKTRVAPIKPVSIPRLELNAALLLSRLLSIVKTSLTIP 401
Query: 183 LHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRS 362
L WTDS IVL WL+ P + T+V NR +EI S + W +V T NP+D +R
Sbjct: 402 LFSTSCWTDSEIVLHWLSAPPRRWNTYVCNRTSEILSDFPRSCWNHVRTEDNPADCASRG 461
Query: 363 LNAEDLFHCQLWWKGPEFLKNNKSSWP 443
L+ L +LWWKGP +L S WP
Sbjct: 462 LHPSKLLEHRLWWKGPSWLATPTSEWP 488
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 103 bits (247), Expect = 2e-22
Identities = 49/144 (34%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Frame = +3
Query: 15 AYLRTVTEAEEVTVHLLCSKNKVAPLKSL-SIPRLELCGALLGARLSDKITSSLRLKLHD 191
AY V V+++ SK++V P+K+ +IP+LELC A L + L ++ S+ + +
Sbjct: 1104 AYAAVVYAKVGPHVNIIASKSRVNPIKNRKTIPKLELCAAHLLSELIQRLKGSID-NIME 1162
Query: 192 YFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTNLNPSDHLTRSLNA 371
+ W+DSTI L W+N+ +K++ F++ R +I+ K +W +V + NP+D +R +++
Sbjct: 1163 IYAWSDSTITLAWINSGQSKIK-FIKRRTDDIRKL-KNTEWNHVKSEDNPADLASRGVDS 1220
Query: 372 EDLFHCQLWWKGPEFLKNNKSSWP 443
L +C WWKGP++L + K WP
Sbjct: 1221 NQLINCDFWWKGPKWLADPKELWP 1244
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 KNNKSSWPVFDFKSNNQVLPEVKQEVTSMITQSSESWF-PFSK 545
++ S+ + + SNN ++ ++K V+S++ S WF P SK
Sbjct: 38 EDESSAGALRESDSNNSIMGKMKMRVSSILPASLSGWFSPSSK 80
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,621,758
Number of Sequences: 53049
Number of extensions: 442681
Number of successful extensions: 928
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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