Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L03
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 92 3e-19
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 69 3e-12
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical ... 28 3.9
Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical... 27 9.0
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 91.9 bits (218), Expect = 3e-19
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLK--SLSIPRLELCGALLGARLSDKITSSLR 176
Y YL+ + + + LL SKNK+ P +L+IP++EL +GA L+ + LR
Sbjct: 1448 YATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLR 1507
Query: 177 LKLHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTK-------TNDWRYVPTNL 335
L + + ++TDS+ W+ + Q +V NRV I + T+ +R+ PT
Sbjct: 1508 LDVAEVIFFTDSSCASYWILSNKTTRQ-WVSNRVETIYQVKEKFATDGITSSFRHCPTKD 1566
Query: 336 NPSDHLTRSLNAEDLFHCQLWWKGPEFLKNNKSSWP 443
NP+D TR ++ +L +C W+ GPEFLK +WP
Sbjct: 1567 NPADIATRGMSTNELQNCSFWFNGPEFLKEPPENWP 1602
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 91.9 bits (218), Expect = 3e-19
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Frame = +3
Query: 3 YGACAYLRTVTEAEEVTVHLLCSKNKVAPLK--SLSIPRLELCGALLGARLSDKITSSLR 176
Y YL+ + + + LL SKNK+ P +L+IP++EL +GA L+ + LR
Sbjct: 1448 YATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLR 1507
Query: 177 LKLHDYFYWTDSTIVLGWLNTPTNKLQTFVRNRVAEIQSTTK-------TNDWRYVPTNL 335
L + + ++TDS+ W+ + Q +V NRV I + T+ +R+ PT
Sbjct: 1508 LDVAEVIFFTDSSCASYWILSNKTTRQ-WVSNRVETIYQVKEKFATDGITSSFRHCPTKD 1566
Query: 336 NPSDHLTRSLNAEDLFHCQLWWKGPEFLKNNKSSWP 443
NP+D TR ++ +L +C W+ GPEFLK +WP
Sbjct: 1567 NPADIATRGMSTNELQNCSFWFNGPEFLKEPPENWP 1602
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 68.5 bits (160), Expect = 3e-12
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Frame = +3
Query: 9 ACAYLRTVTEAEEVTVHLLCSKNKVAPLKSL-SIPRLELCGALLGARLSDKITSSLR--- 176
AC Y++ + V+LL K+ V LK +IP+LE+ + + ++L+
Sbjct: 525 ACIYVKN-----KYGVNLLFGKSNVKSLKEKWTIPKLEVQALKVATDRALSTLTALQDGD 579
Query: 177 LKLHDYFYWTDSTIVLGWLNTPTNKLQT--FVRNRVAEIQSTTKTNDWR-------YVPT 329
+K+ ++DS I L WL + K + ++NR+ I+ T +T + YV T
Sbjct: 580 IKVTKVILFSDSEITLAWLRSEPGKKEVGILIKNRIESIRKTNETMLQKGVQVFFGYVNT 639
Query: 330 NLNPSDHLTRSLNAEDLFHCQLWWKGPEFLKNNKSSW 440
NP+D TR L ED F +WWKGPE+ K++ S+W
Sbjct: 640 LENPADLRTRGLPKED-FQNSIWWKGPEYAKSDSSTW 675
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
K06C4.15 protein.
Length = 1067
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 YGACAYLR-TVTEAEEVTVHLLCSKNKVAPLKSLS--IPRLELCGALLGARLSDKITSSL 173
Y A AY + + + L+ SKNK+ P K + IP+LEL G +G+ L+ I L
Sbjct: 990 YAAAAYAYFSYGDDRPPVISLITSKNKIKPSKETNWTIPKLELLGIEIGSNLASSIVKEL 1049
Query: 174 RLKLHDYFYWTDSTIVL 224
K+ + +TDS+ L
Sbjct: 1050 SCKVTNIRLFTDSSCAL 1066
>AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical
protein Y67D8C.6 protein.
Length = 264
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 148 SLAPRRAPQSSNRGIESDFNGATLFFEHNK 59
SL+ R+P SS G SD++G ++F E ++
Sbjct: 16 SLSTFRSPVSSTSGYLSDYSGGSIFLEDDE 45
>Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical
protein F15H9.1 protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 60 LLCSKNKVAPLK-SLSIPRLELCGALLGARLSDKITSSLRLK 182
+ C N PL +I RLE CG +L S+ IT S K
Sbjct: 11 IACGFNNTQPLSYEENIQRLESCGKILPEESSNSITKSKYFK 52
>AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical
protein Y75B8A.31 protein.
Length = 313
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 225 GWLNTPTNKLQTFVRNRVAEIQSTTKTNDW 314
G LN+P+ K++ + VAE+ + T+ ++W
Sbjct: 230 GALNSPSYKVREYREGNVAELWAGTQIHEW 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,010,764
Number of Sequences: 27780
Number of extensions: 242860
Number of successful extensions: 630
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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