Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L03
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    27   0.13 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 174 RLKLHD-YFYWTDSTIVLGWLNTPTNKLQTF 263
           R+K +D Y+ W D+ IV G    P N L  F
Sbjct: 138 RIKPYDEYYVWRDARIVNGTRQPPNNWLSVF 168


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 96  SLSIPRLELCGALLGARLSDKI 161
           SLS+  +ELCG  L  RL + I
Sbjct: 130 SLSLITMELCGTTLQNRLDEAI 151


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 228 WLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTN 332
           W N P    +   ++ V+  +S  K NDW+    N
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQNN 708


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 228 WLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTN 332
           W N P    +   ++ V+  +S  K NDW+    N
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQNN 708


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 228 WLNTPTNKLQTFVRNRVAEIQSTTKTNDWRYVPTN 332
           W N P    +   ++ V+  +S  K NDW+    N
Sbjct: 674 WSNRPNLLFKDEAKDLVSVNKSWNKWNDWQETQNN 708


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,023
Number of Sequences: 438
Number of extensions: 2860
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)