Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L02
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.43 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.43 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.43 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.43 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.43 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    25   0.56 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   3.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.2  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSS 175


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 81  STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 131


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
           ST   +TP+ S  T + GL +   V +S  G P   + + +++S  S++ S
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 139 PQRLSFTPDIASFTSTSYSPEPKA 68
           PQR + T   AS  S S SPEP++
Sbjct: 203 PQRTASTASSASNYSPSQSPEPES 226


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 235 STVVSATPAKSPPTNTCGLLTLCIVFSSTSGNP 137
           ST   +TP+ S  T + GL +   V +S  G P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 352 RSISSIGQWNFGSSI 308
           ++I SIG WN G++I
Sbjct: 97  KTIISIGGWNAGNAI 111


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 532 PRTIRGDTLVTISLSR 485
           PR+I G T VTI+ ++
Sbjct: 47  PRSIHGGTTVTITATQ 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,405
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)