Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L02
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0670 - 30764007-30764135,30764404-30764548,30765200-307653... 71 6e-13
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 31 0.59
02_03_0025 - 14038896-14039456,14040279-14040491 31 0.78
06_02_0280 - 13708651-13708839,13708895-13709164,13709889-137104... 30 1.4
02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790... 29 1.8
09_03_0046 + 11862923-11863112,11863225-11863406,11863522-118636... 29 2.4
07_01_0986 - 8314733-8314783,8315895-8318381 29 2.4
01_06_0716 - 31425189-31426460 29 2.4
06_01_1004 - 7802989-7803498 29 3.1
04_04_0253 - 23944279-23944358,23944634-23944711,23945118-239452... 29 3.1
12_01_0485 - 3848721-3849227,3852019-3852369 28 4.1
09_03_0153 - 12814596-12815645 28 4.1
05_05_0148 - 22729469-22730116,22730215-22730589 28 4.1
08_02_0448 + 17239987-17240489,17240633-17241042,17241183-172414... 28 5.5
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 27 9.6
03_04_0211 + 18661949-18662470 27 9.6
03_01_0051 + 445035-445303,445380-445590,445737-445930,446151-44... 27 9.6
>02_05_0670 -
30764007-30764135,30764404-30764548,30765200-30765309,
30765578-30765761,30765857-30765969,30766242-30766412,
30766493-30766756,30767537-30767782
Length = 453
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +3
Query: 342 EIDLSVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
E DLSV V G+K NPF + S PP T+ +++R F++GWG + KT SLD + V NV+PR
Sbjct: 37 EPDLSVRVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPR 96
Query: 522 IVR 530
R
Sbjct: 97 YAR 99
>09_06_0205 -
21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 31.1 bits (67), Expect = 0.59
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +3
Query: 123 KLNRWGLPDVDEKTMQSVSNPQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQGISFD 302
KLN L + KT+ VS PQ+ D G+ E V KS+ + +
Sbjct: 487 KLNEDCLLNEISKTITDVSCPQMPHFND--GLCP---EDVGSSKSSCSVRKKSSKRQNSA 541
Query: 303 SPIELPKFH-----CPIDEIDLSV--EVCGIKFENPFGLASAPPTTSSAMI 434
+ I KFH C D +D S + CG+ F +PF LA P + S A I
Sbjct: 542 NAIAQMKFHDMQAVCESDYMDRSFIKDTCGLHFFHPFSLADTPRSHSRARI 592
>02_03_0025 - 14038896-14039456,14040279-14040491
Length = 257
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 279 YLQGISFDSPIELPKFHCPIDEIDLSVEVCGIKFENPFGLASAPPTTSSAMIRRG 443
YL GI+ D PI++ F P+D + L ++ K E P L S +T+ A I G
Sbjct: 189 YLAGIAEDVPIKIRDFFIPVDFVVLDMDT---KKETPLILGSPFLSTADANIDVG 240
>06_02_0280 -
13708651-13708839,13708895-13709164,13709889-13710476,
13710511-13710686,13710897-13711029,13711193-13711462,
13711521-13711889
Length = 664
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +3
Query: 276 CYLQGISFDSPIELPKFHCPIDEIDLSVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQG 455
CYL I+ D P+++ F P+D + L ++ + E P L +T+ A I G E
Sbjct: 360 CYLARIAEDVPVKIQDFFIPVDFVVLDMDT---EKETPLILGRPFLSTAGANIDVGMESI 416
Query: 456 WGFAVTKTFSLDKDMVTNVSP 518
K SL N +P
Sbjct: 417 RFHINVKKRSLSSSQGPNNAP 437
>02_02_0211 +
7898434-7898574,7898759-7899349,7899575-7899821,
7900020-7900118,7900158-7900321,7900371-7900870,
7901007-7901256,7901461-7901549,7901823-7902064,
7902175-7902479,7902798-7902906,7903150-7903313
Length = 966
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 276 CYLQGISFDSPIELPKFHCPIDEIDLSV 359
CYL GI+ D P+++ F P+D + L +
Sbjct: 515 CYLAGIAEDVPVKIRDFFIPVDFVVLDM 542
>09_03_0046 +
11862923-11863112,11863225-11863406,11863522-11863634,
11863894-11864140,11864333-11864452,11864601-11864604,
11864800-11864846,11864992-11865068,11865381-11865431,
11865519-11865567,11865694-11865718,11866226-11866344
Length = 407
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = -1
Query: 394 PNGFSNFIPHTSTDRSISSIGQWNFGSSIGES-NEMPCK*QCMYQAADLPSFTDSTVVSA 218
P+ F ++P S+ RS SS + G+S+G + + P + + Q ++L F +
Sbjct: 51 PSSFCPYLPRLSSARSFSSSTSCSAGASLGGAVSTSPSEQEKQRQQSEL-IFLGTGTSEG 109
Query: 217 TPAKSPPTNTCGLLTLCIVFSSTSGNPQR 131
P S TN T+C ++ GN R
Sbjct: 110 IPRVSCLTNPSKTCTVC-TKAAEPGNRNR 137
>07_01_0986 - 8314733-8314783,8315895-8318381
Length = 845
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 223 SATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYSPEPKADMI 59
S++P PP++ G L + + T +TPD+A S+++S P AD++
Sbjct: 32 SSSPPSQPPSSPAGELLRLLSAAPT--------WTPDLARAVSSTFSASPTADVV 78
>01_06_0716 - 31425189-31426460
Length = 423
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 493 LSRENVLVTA-NPQPCSNPLRIMAELVVGGALANPNGFSNFI-PHTSTDRSISSIGQWNF 320
+SR V A NP+ C N + AE+ +G A + GF P T+T RS S ++
Sbjct: 319 VSRLRVFRAAGNPKLCYNRSVLSAEIAIGVAPCDKYGFPVMAPPATATARSERS-ADYDD 377
Query: 319 GSSIGESNE 293
G+ G+++E
Sbjct: 378 GAKDGDADE 386
>06_01_1004 - 7802989-7803498
Length = 169
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 256 DLPSFTDSTVVSATPAKSPPTNTCGL 179
+L S + ST V+++PA SPP C L
Sbjct: 4 ELSSSSSSTTVASSPASSPPLGRCVL 29
>04_04_0253 -
23944279-23944358,23944634-23944711,23945118-23945235,
23945496-23945594,23946615-23947418
Length = 392
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -1
Query: 262 AADLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
AA PSF D A S P+ L++ +V ++ P L+ + FT +SYS
Sbjct: 42 AAAPPSFYDDDDDDQARASSGPS-----LSISVVGHASVAQPSSLA--DPLGRFTRSSYS 94
Query: 82 PEPKA 68
P+P A
Sbjct: 95 PDPSA 99
>12_01_0485 - 3848721-3849227,3852019-3852369
Length = 285
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 159 KTMQSVSN----PQVFVGGDLAGVAETTVESVNDGKSAAWY 269
+T+++ SN PQVFVGG+L G + G+ AA +
Sbjct: 243 ETLKTYSNWPTFPQVFVGGELVGGCDIVSSMAEKGELAALF 283
>09_03_0153 - 12814596-12815645
Length = 349
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 342 EIDLSVEVCGIKF-ENPFGLASAPPTTSS 425
+++LSVE+CG F E P GL TTSS
Sbjct: 47 DVNLSVEMCGNTFLETPQGLVLVLMTTSS 75
>05_05_0148 - 22729469-22730116,22730215-22730589
Length = 340
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 400 PALRLQPVPP*YEGDSSKAGDSLSPRRFLLTRIW 501
PA +LQP+PP SS +GD L L R++
Sbjct: 86 PACQLQPLPPVSSSTSSSSGDLLEFSSGTLRRVF 119
>08_02_0448 +
17239987-17240489,17240633-17241042,17241183-17241406,
17241590-17242018,17244726-17244809
Length = 549
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 276 CYLQGISFDSPIELPKFHCPIDEIDLSVEV 365
CY GI+ D PI++ F +D ++L VE+
Sbjct: 419 CYPVGIAEDVPIKVRDFFILVDFVELEVEL 448
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 351 LSVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDK-DMVTNVSPRIV 527
L +E+ G KF NP GLA+ + A+ G G GF + S+ N PRI
Sbjct: 133 LGLEIWGRKFTNPIGLAAGFDKNAEAV--EGL-LGMGFGFVEVGSVTPLPQEGNPKPRIF 189
Query: 528 R 530
R
Sbjct: 190 R 190
>03_04_0211 + 18661949-18662470
Length = 173
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 478 VLVTANPQPCSNPLRIMAELVVGGALANPNGFSNFIPHTSTDRSISSIGQ 329
VLV+ P P ++ +A +V+ L + F+P +S RS SS+ Q
Sbjct: 69 VLVSVQPLPAAHIASSLAPVVIVAVLPSFPVAVAFVPPSSRSRSSSSLRQ 118
>03_01_0051 +
445035-445303,445380-445590,445737-445930,446151-446228,
447049-447141,448495-448525,448729-449058
Length = 401
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 119 GETQPLGITRRGREDNAKRQ*PA 187
GET+P+GI R E+ A Q PA
Sbjct: 273 GETKPIGIIREEEEEEAVGQAPA 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,200,656
Number of Sequences: 37544
Number of extensions: 348701
Number of successful extensions: 1106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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