Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L02
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 244 2e-64
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 244 2e-64
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 244 2e-64
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 244 2e-64
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 244 2e-64
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 244 2e-64
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 244 2e-64
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 34 0.37
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 34 0.37
AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens ... 31 3.4
X95670-1|CAA64973.1| 55|Homo sapiens dihydropyrimidine dehydro... 30 4.5
U57655-1|AAB07049.1| 55|Homo sapiens dihydropyrimidine dehydro... 30 4.5
AY506286-1|AAS88649.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY506284-1|AAS88647.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY506282-1|AAS88645.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY506281-1|AAS88644.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY506275-1|AAS88638.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY506272-1|AAS88635.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307791-1|AAQ92687.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307789-1|AAQ92685.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307788-1|AAQ92684.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307787-1|AAQ92683.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307785-1|AAQ92681.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307782-1|AAQ92678.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307780-1|AAQ92676.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307779-1|AAQ92675.1| 79|Homo sapiens microcephalin protein. 30 4.5
AY307778-1|AAQ92674.1| 79|Homo sapiens microcephalin protein. 30 4.5
AL034424-3|CAC36102.1| 551|Homo sapiens chromosome 20 open read... 30 4.5
AK128205-1|BAC87324.1| 1047|Homo sapiens protein ( Homo sapiens ... 30 4.5
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 29 7.9
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (597), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFVNPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 244 bits (596), Expect = 2e-64
Identities = 116/182 (63%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
+ G+W ED DQ++ LKA+ +ISAFGS L D VKEA+S +K NRWGLP+VD +TMQ+ S
Sbjct: 415 ETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEALSPIKFNRWGLPEVDPETMQT-SE 473
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+ G+A TTVESVNDGK A+WY+H Y+Q G S + ELP F+ PID +D+
Sbjct: 474 AWVFAGGDVVGLANTTVESVNDGKQASWYIHKYVQSQYGASVSAKPELPLFYTPIDLVDI 533
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SVE+ G+KF NPFGLASA P TS++MIRR FE GWGFA+TKTFSLDKD+VTNVSPRI+RG
Sbjct: 534 SVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIRG 593
Query: 534 VT 539
T
Sbjct: 594 TT 595
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 33.9 bits (74), Expect = 0.37
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = -1
Query: 256 DLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
D PSFT S S TP+ S P++T + T ST SFT I + +TS+S
Sbjct: 163 DTPSFTSSITTSETPSHSTPSSTSLITTTKTTSHSTP------SFTSSITTTETTSHS 214
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 33.9 bits (74), Expect = 0.37
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = -1
Query: 256 DLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
D PSFT S S TP+ S P++T + T ST SFT I + +TS+S
Sbjct: 163 DTPSFTSSITTSETPSHSTPSSTSLITTTKTTSHSTP------SFTSSITTTETTSHS 214
>AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ12847 fis, clone NT2RP2003347. ).
Length = 740
Score = 30.7 bits (66), Expect = 3.4
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = -1
Query: 337 IGQWNFGSSIGESNEMP----CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGL 179
+G W S+ P C+ +C A F D V+ +PA SPP C L
Sbjct: 624 LGHWISEEPFELSHHFPAAPLCRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCEL 683
Query: 178 LTLCIVFSSTSGNPQRLSFTPDIASFTSTSYSPEPKADMIKLAFSW 41
+ LC G R+S P AS YS + KA + L+ W
Sbjct: 684 VHLC------GG---RVSQVPRQASIVIGPYSGKKKATVKYLSEKW 720
>X95670-1|CAA64973.1| 55|Homo sapiens dihydropyrimidine
dehydrogenase (NADP+) protein.
Length = 55
Score = 30.3 bits (65), Expect = 4.5
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 495 DMVTNVSPRIVRGVT 539
D+VTNVSPRI+RG T
Sbjct: 1 DIVTNVSPRIIRGTT 15
>U57655-1|AAB07049.1| 55|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 55
Score = 30.3 bits (65), Expect = 4.5
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 495 DMVTNVSPRIVRGVT 539
D+VTNVSPRI+RG T
Sbjct: 1 DIVTNVSPRIIRGTT 15
>AY506286-1|AAS88649.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY506284-1|AAS88647.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY506282-1|AAS88645.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY506281-1|AAS88644.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY506275-1|AAS88638.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY506272-1|AAS88635.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307791-1|AAQ92687.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307789-1|AAQ92685.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307788-1|AAQ92684.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307787-1|AAQ92683.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307785-1|AAQ92681.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307782-1|AAQ92678.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307780-1|AAQ92676.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307779-1|AAQ92675.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AY307778-1|AAQ92674.1| 79|Homo sapiens microcephalin protein.
Length = 79
Score = 30.3 bits (65), Expect = 4.5
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -1
Query: 286 CK*QCMYQAADLPS--FTDSTVVSATPAKSPP-TNTCGLLTLCIVFSSTSGNPQRLSFTP 116
C+ +C A F D V+ +PA SPP C L+ LC G R+S P
Sbjct: 2 CRSECHLSAGPYRGTLFADQPVMFVSPASSPPVAKLCELVHLC------GG---RVSQVP 52
Query: 115 DIASFTSTSYSPEPKADMIKLAFSW 41
AS YS + KA + L+ W
Sbjct: 53 RQASIVIGPYSGKKKATVKYLSEKW 77
>AL034424-3|CAC36102.1| 551|Homo sapiens chromosome 20 open reading
frame 123 protein.
Length = 551
Score = 30.3 bits (65), Expect = 4.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 258 AAWYMHCYLQGISFDS 305
+AWY+HCYL + FD+
Sbjct: 226 SAWYLHCYLTDLRFDN 241
>AK128205-1|BAC87324.1| 1047|Homo sapiens protein ( Homo sapiens
cDNA FLJ46337 fis, clone TESTI4046245. ).
Length = 1047
Score = 30.3 bits (65), Expect = 4.5
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = -1
Query: 442 PLRIMAELVVGGA--LANPNGFSNFIPHTSTDRSISSIGQWNFGSSIGESNEMPCK*QCM 269
PLR + ++ G L +G + +PH S+G + + G P
Sbjct: 6 PLRTLGPVMYGKLPRLETDSGLEHSLPH--------SVGNQDPCTYKGSYFSCPMAGTPK 57
Query: 268 YQAADLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTS 89
++ L S+T + +T PP LLT C+ + S + P+++ D +
Sbjct: 58 AESEQLASWTPYPPLYSTGMAGPPLQADNLLTNCLFYRSPAEGPEKMQ---DSSPVELLP 114
Query: 88 YSPEP 74
+SP+P
Sbjct: 115 FSPQP 119
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 232 TVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYSP 80
+V+ TP+ P T++ +LT +ST+ TP TST+ +P
Sbjct: 1 SVLGTTPSPVPTTSSISVLTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAP 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,798,236
Number of Sequences: 237096
Number of extensions: 1866016
Number of successful extensions: 4561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4544
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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