Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L02
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 234 3e-62
AL132863-11|CAB60578.2| 143|Caenorhabditis elegans Hypothetical... 29 1.6
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 29 2.1
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 2.1
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.1
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 29 2.1
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 28 3.7
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 28 4.9
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 4.9
U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mito... 27 6.5
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 27 8.6
AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical... 27 8.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 8.6
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical
protein C25F6.3 protein.
Length = 1059
Score = 234 bits (572), Expect = 3e-62
Identities = 113/182 (62%), Positives = 137/182 (75%), Gaps = 3/182 (1%)
Frame = +3
Query: 3 DDGEWIEDPDQILQLKANFIISAFGSGLYDVDVKEAMSGVKLNRWGLPDVDEKTMQSVSN 182
D+G+W ED +QI+ LK +++ISAFGS L + V A+ +LN+WG +VD T Q+ S
Sbjct: 429 DNGKWYEDEEQIVILKCDYVISAFGSTLKEDAVLSALQPCQLNKWGGIEVDSTTQQT-SE 487
Query: 183 PQVFVGGDLAGVAETTVESVNDGKSAAWYMHCYLQ---GISFDSPIELPKFHCPIDEIDL 353
VF GGD+AGVAETTVESVNDGK AAW MH Y+Q G ELP+F PIDE+D+
Sbjct: 488 KWVFAGGDVAGVAETTVESVNDGKIAAWNMHRYIQSLHGNQVSETPELPQFFTPIDEVDI 547
Query: 354 SVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPRIVRG 533
SV++CG+KFENPFGLASAPPTTS M RR FEQGWGF +TKT+ LDKD+VTNVSPRIVRG
Sbjct: 548 SVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPRIVRG 607
Query: 534 VT 539
T
Sbjct: 608 ST 609
>AL132863-11|CAB60578.2| 143|Caenorhabditis elegans Hypothetical
protein Y37H2A.11 protein.
Length = 143
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 274 CMYQAADLPSFTDSTVVSATPAKSPPT--NTCGLLTL 170
C+ A L +FT + TP +SP T N C +LTL
Sbjct: 71 CVSCTAGLLTFTTGNIGDTTPIQSPGTDANNCAILTL 107
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 390 FGLASAPPTTSSAMIRRGFEQGWGFAVTKTFSLDKDMVTNVSPR 521
FG ++ PP SS+ RR F+Q +G+A + D M + PR
Sbjct: 308 FGESAVPPAASSS--RRQFDQVYGYASSSEERYDTPMSSGRLPR 349
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 29.1 bits (62), Expect = 2.1
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Frame = -1
Query: 475 LVTANPQPCSNPLRIMAELVVGGALANPNGFSNFIPHTST---DRSISSIGQWNFGSSIG 305
+V + +P + + + +L G+L + FS+F +S D S N S
Sbjct: 442 MVKMDQKPMLDSMAFLQQLQQSGSLTEAD-FSSFANGSSLNFLDSLPKSSEVININSGFV 500
Query: 304 ESNEMPCK*QCMYQAADLPSFTDSTVVSATPAK--SPPTNTCGLLTLCIVFSSTSGNPQR 131
+ EM + +AA S +D + S TP SP T+T F S+ N
Sbjct: 501 KKEEMEEDTENHVEAASSSS-SDERIKSETPDTYGSPNTSTTDQNEQLAAFVSSLSNSNP 559
Query: 130 LSFTPDIASFTSTSYSPEP 74
+ F A+ STS +P P
Sbjct: 560 MMFAMLNAAGNSTSSAPAP 578
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 250 PSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
P+ T +TVV + + + + T T I+ SST+ S TP + T+ + S
Sbjct: 131 PTVTSTTVVDTSESSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTS 186
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 472 VTANPQPCSNPLRIMAELVVGGALANPNGFSNFIPHTSTDRSISSIGQWN 323
VT P P SNP + ++ G + +PN N+ TS + ++++G +N
Sbjct: 290 VTVTPAP-SNPSGCNSTIMSFGTITSPNFPMNYNNITSCNYLLTTLGSYN 338
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical protein
F41H10.3a protein.
Length = 1140
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -1
Query: 259 ADLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYSP 80
A P+ + SATPA + T S NP ++T I T+ +P
Sbjct: 1048 APAPAQASAQSTSATPALVDTISAGSTTTETTTGDSNQSNPPLRTYTSHIRKTPGTTLTP 1107
Query: 79 EPKADMIK 56
E D I+
Sbjct: 1108 EEIGDAIR 1115
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 268 YQAADLPSFTDSTVVSATP-AKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTST 92
Y++++ S + +T + TP ++PPT T +V S T+ P+R + T I + T+T
Sbjct: 267 YESSEDISESHTTPPTQTPPTQTPPTTTTTRRVTVVVTSPTTTTPRR-TITTRIWTTTTT 325
Query: 91 SYSP 80
P
Sbjct: 326 QAPP 329
>U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mitotic
condensin subunit)homolog protein 1 protein.
Length = 645
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +3
Query: 288 GISFDSPIELPKFHCPIDEIDLSVEVCGIKFENPFGLASAPPTTSSAMIRRGFEQGWGFA 467
G +FD P E+ C I + G EN + P SS RRG + +GF
Sbjct: 475 GDNFDFPQEVEHQECA--PIPIQSGFAGENKENEDAEDWSDPFGSSNSSRRGQLEAYGFG 532
Query: 468 VTKTFSLDKDMVTNVSPRIVRGVT 539
T T+ D + I++ V+
Sbjct: 533 NTSTYKEDDGKWAKRAKHILKKVS 556
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.6
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -1
Query: 262 AADLPSFTDSTVVSATPAKSPPTNTCGLLTLCIVFSSTSGNPQRLSFTPDIASFTSTSYS 83
AA LP T S+TPAK+P T GL ++TS F A+ T+TS +
Sbjct: 380 AASLP--TGGLFGSSTPAKTPAAPTAGLFGASST-TTTSAPATGSLFGTAPATTTATSAA 436
Query: 82 P 80
P
Sbjct: 437 P 437
>AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical
protein Y9C9A.16 protein.
Length = 392
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 129 NRWGLPDVDEKTMQSVSNPQVFVGGD 206
++ G DVD +T+QS + P VF GD
Sbjct: 311 DKTGFMDVDPQTLQSKNYPNVFGVGD 336
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 8.6
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 312 ELPKFHCPIDEIDLSVEVCGIKFEN----PFGLASAPPTTSSAMIRRGFEQGWGFAVTKT 479
E P C + ++S EVC FEN A P TSSA +R +G G K+
Sbjct: 49 EHPNCTCTVVSTNVSDEVCKKDFENGQEDVLCGAGTPKKTSSAQLRDQRCEG-GLQWCKS 107
Query: 480 FSLDK 494
LDK
Sbjct: 108 HHLDK 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,069
Number of Sequences: 27780
Number of extensions: 274891
Number of successful extensions: 819
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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