Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_L01
         (485 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1620.06c |||ribose-phosphate pyrophosphokinase |Schizosaccha...   190   7e-50
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo...   145   4e-36
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar...   122   3e-29
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb...    29   0.37 
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB...    26   3.5  
SPCC736.05 |wtf7||wtf element Wtf7|Schizosaccharomyces pombe|chr...    25   4.6  
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po...    25   8.0  
SPAC630.10 |||conserved fungal protein|Schizosaccharomyces pombe...    25   8.0  
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p...    25   8.0  

>SPCC1620.06c |||ribose-phosphate pyrophosphokinase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 321

 Score =  190 bits (464), Expect = 7e-50
 Identities = 81/127 (63%), Positives = 110/127 (86%)
 Frame = +3

Query: 105 NIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGE 284
           +IK+F G+SHPE+A+K+  R+G+ LG+    ++SN+ET+V IGESVR EDV+I+Q+GCG 
Sbjct: 5   SIKIFAGNSHPELAEKVARRIGLSLGKVAVVQYSNRETSVTIGESVRDEDVFILQTGCGS 64

Query: 285 INDNLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAGAD 464
           IND+LMEL IMINAC+ ASA R+TA+IPCFPY+RQDKK+KSRAPITA+L+AN++  AG +
Sbjct: 65  INDHLMELLIMINACRSASARRITAIIPCFPYARQDKKDKSRAPITARLVANMLQTAGCN 124

Query: 465 HVITIDL 485
           H+IT+DL
Sbjct: 125 HIITMDL 131


>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
           Prs1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 409

 Score =  145 bits (351), Expect = 4e-36
 Identities = 70/129 (54%), Positives = 94/129 (72%)
 Frame = +3

Query: 99  MPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGC 278
           M +  +  G SHPE+   I  RLGI     + K+F+N ET+VEI ESVR +DV+I+QSG 
Sbjct: 1   MKSATIIGGGSHPELLHLISNRLGITPCDVSLKRFANGETSVEIRESVRDKDVFILQSGS 60

Query: 279 GEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAG 458
             +ND+LMEL I+I+ACK  SA R+TAV+P FPYS+Q K  K R  ITA+++ANL++VAG
Sbjct: 61  STVNDSLMELLIIISACKGGSAKRITAVMPYFPYSKQSKMRKYRDAITARMVANLLTVAG 120

Query: 459 ADHVITIDL 485
            DH+IT+DL
Sbjct: 121 VDHIITLDL 129


>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 341

 Score =  122 bits (294), Expect = 3e-29
 Identities = 72/153 (47%), Positives = 95/153 (62%), Gaps = 24/153 (15%)
 Frame = +3

Query: 99  MPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGC 278
           M N+ VF   SHP++ + I   L +D+GR    KFSN ET+V I +SVRG DVYIV    
Sbjct: 1   MKNLVVFGTESHPKLTESICEHLCLDIGRVELSKFSNGETSVRIKQSVRGCDVYIVSPAS 60

Query: 279 GEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQ-DKK-EKSRAPI----------- 419
           G++ND+LMEL IMI+ACK ASA +VTAV+P FPYSRQ D+K   S AP+           
Sbjct: 61  GQVNDHLMELLIMISACKTASAKKVTAVLPVFPYSRQPDQKFSFSGAPLSDLQDAVVPCK 120

Query: 420 -----------TAKLLANLISVAGADHVITIDL 485
                      +  L+A+L+  +GADH+IT+DL
Sbjct: 121 KQTGYHPWIAQSGTLVADLLMCSGADHIITMDL 153


>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 602

 Score = 29.1 bits (62), Expect = 0.37
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 30  NPDETTSKEDNKKQRAFNNPNSRMPNIKV 116
           +P +T SK  +KKQR  +NP+  +P+  V
Sbjct: 39  SPGQTVSKRLHKKQRVVSNPDLSLPSSPV 67


>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 588

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 87  PNSRMPNIKVFTGSSHPEIAKKIVARLGI 173
           PNS+   +   +GSSHP  + ++  R  +
Sbjct: 20  PNSKSSRLSSTSGSSHPSSSSRLTVRSAV 48


>SPCC736.05 |wtf7||wtf element Wtf7|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 220

 Score = 25.4 bits (53), Expect = 4.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 75  PFVFYYLLCLWFRQGSF 25
           PF F +  CL+FR+ SF
Sbjct: 128 PFNFIFFACLFFRKASF 144


>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 517

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 304 SIRLSLISPQPLCTMYTSSPLT 239
           S+  +L+S QPLC +  + P+T
Sbjct: 82  SVVFALLSSQPLCIVGVTGPIT 103


>SPAC630.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 270

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 366 PCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVITIDL 485
           PCF Y  + K+ K    I +  + N  S  G   V  IDL
Sbjct: 93  PCFSYCARLKEPKDLLEIGSVSVDNKCSTCGLFRVSRIDL 132


>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 595

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = +1

Query: 46  QAKKIIKN-----KGLLTIQIQECRTSKCLQGALIRRLRKKLLQGSELTSVEQLQRNSAT 210
           +A +I+KN     K  L  Q QE       + +++++  +K L+ +  TS++Q+Q     
Sbjct: 506 EATEILKNNSADLKAQLEKQPQELENRLLQEISILKQRNQKFLKNNA-TSIQQIQYLDEE 564

Query: 211 KKQTLKLVN 237
             +TLK +N
Sbjct: 565 LGKTLKQLN 573


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,882,207
Number of Sequences: 5004
Number of extensions: 36136
Number of successful extensions: 131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 188065158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)