Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_L01
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 213 6e-56
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 213 6e-56
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 211 2e-55
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 200 4e-52
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 115 2e-26
Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical pr... 25 0.62
AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical ... 30 0.77
Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical p... 28 4.1
AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical ... 28 4.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 7.2
U58744-1|AAB00618.1| 141|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical... 27 7.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 7.2
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct... 27 7.2
AF106575-8|AAC78169.1| 395|Caenorhabditis elegans Hypothetical ... 27 7.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 7.2
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 7.2
AF106577-12|AAC78182.1| 106|Caenorhabditis elegans Hypothetical... 27 9.5
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 213 bits (520), Expect = 6e-56
Identities = 98/130 (75%), Positives = 118/130 (90%)
Frame = +3
Query: 96 RMPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSG 275
RMPNIKVF+GSSHP+++ +I RL +++ +A+ KKFSNKETNVEIGESVRGEDVYI+QS
Sbjct: 58 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117
Query: 276 CGEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVA 455
GEINDNLMEL IMINACKIAS+ RV AVIP FPY+RQDKK+KSRAPI+AKL+AN++SVA
Sbjct: 118 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 177
Query: 456 GADHVITIDL 485
GADH+IT+DL
Sbjct: 178 GADHIITMDL 187
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 213 bits (520), Expect = 6e-56
Identities = 98/130 (75%), Positives = 118/130 (90%)
Frame = +3
Query: 96 RMPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSG 275
RMPNIKVF+GSSHP+++ +I RL +++ +A+ KKFSNKETNVEIGESVRGEDVYI+QS
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186
Query: 276 CGEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVA 455
GEINDNLMEL IMINACKIAS+ RV AVIP FPY+RQDKK+KSRAPI+AKL+AN++SVA
Sbjct: 187 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 246
Query: 456 GADHVITIDL 485
GADH+IT+DL
Sbjct: 247 GADHIITMDL 256
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 211 bits (515), Expect = 2e-55
Identities = 97/129 (75%), Positives = 117/129 (90%)
Frame = +3
Query: 99 MPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGC 278
MPNIKVF+GSSHP+++ +I RL +++ +A+ KKFSNKETNVEIGESVRGEDVYI+QS
Sbjct: 1 MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60
Query: 279 GEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAG 458
GEINDNLMEL IMINACKIAS+ RV AVIP FPY+RQDKK+KSRAPI+AKL+AN++SVAG
Sbjct: 61 GEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAG 120
Query: 459 ADHVITIDL 485
ADH+IT+DL
Sbjct: 121 ADHIITMDL 129
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 200 bits (488), Expect = 4e-52
Identities = 92/124 (74%), Positives = 112/124 (90%)
Frame = +3
Query: 114 VFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEIND 293
VF+GSSHP+++ +I RL +++ +A+ KKFSNKETNVEIGESVRGEDVYI+QS GEIND
Sbjct: 5 VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64
Query: 294 NLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVI 473
NLMEL IMINACKIAS+ RV AVIP FPY+RQDKK+KSRAPI+AKL+AN++SVAGADH+I
Sbjct: 65 NLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 124
Query: 474 TIDL 485
T+DL
Sbjct: 125 TMDL 128
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 115 bits (277), Expect = 2e-26
Identities = 54/124 (43%), Positives = 87/124 (70%)
Frame = +3
Query: 114 VFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEIND 293
+ TG+SHPE+AK + RL I LG AT +N+ET+V+I +SVRG+ V+I+QSG +N+
Sbjct: 13 LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72
Query: 294 NLMELFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVI 473
++MEL ++I ACK + + +T ++P PYS+Q + + R+ I KL+A +I AGA ++
Sbjct: 73 DVMELLVLIYACKTSMSKTITVIMPYLPYSKQCRMLR-RSSIAMKLVAEMICKAGASRLV 131
Query: 474 TIDL 485
++DL
Sbjct: 132 SLDL 135
>Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical
protein F49H6.11 protein.
Length = 327
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 344 SRRNFTSVNHDE*FHKVVVNFTTTALYYVHIL 249
S + + +DE K+V FT +Y +HIL
Sbjct: 84 STKAHLGIQNDENLMKIVAVFTLFLIYILHIL 115
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 269 LYYVHILTSY*FTNFNVCFFVAEFLCS 189
LY + ++ Y NFNV F + +F+CS
Sbjct: 141 LYSQNYISKY-VRNFNVFFVLKDFVCS 166
>AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical
protein T21G5.4 protein.
Length = 274
Score = 30.3 bits (65), Expect = 0.77
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 173 NSEPCNNFFRNLRMRAPCKHFDV 105
N + CN+FFR LR APC V
Sbjct: 55 NCKDCNDFFRALRFAAPCAKITV 77
>Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical
protein C25G4.6 protein.
Length = 274
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 173 NSEPCNNFFRNLRMRAPC 120
N + CN+FFR LR APC
Sbjct: 55 NCKDCNDFFRALRFAAPC 72
>Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical
protein F10A3.15 protein.
Length = 319
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -1
Query: 152 FFRNLRMRAPCKH--FDVRHS*IWIVKSPLFFIIFFACGF 39
F+R L +++P F ++ + IW++ + F+I+F C F
Sbjct: 114 FYRYLSVKSPSNLSIFSLKAAPIWVISLSVNFVIWFFCFF 153
>AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical
protein C39B5.7 protein.
Length = 291
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 39 ETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSHPEIAKKIV 158
ET +EDN + AFN+ S + N+K F ++ ++ ++ +
Sbjct: 77 ETKIEEDNFMRAAFNDLASVLKNVKKFVFQNYSKVKQQAI 116
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.2
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = -2
Query: 445 IRLANNFAVIGARLFSFLSCLE*GKQGITAVTLEADAILQALIMMNSS----IRLSLISP 278
IR + GA+ + ++ L QG T AIL+A I IRLSL S
Sbjct: 2206 IRASRTGMEYGAQKLTKVNKLSTANQGRTDKMARNIAILKAKIEQAREKAYQIRLSLNSG 2265
Query: 277 QP-LCTMYTSSPLTDSPISTF 218
+ LC SP + SP++TF
Sbjct: 2266 ERGLCKRSYISPASPSPVNTF 2286
>U58744-1|AAB00618.1| 141|Caenorhabditis elegans Hypothetical
protein F55F1.2 protein.
Length = 141
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 306 LFIMINACKIASASRVTAVIPCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVI 473
L+ I+ACK+ AS + + + C P+ +SR TA + LI+ H I
Sbjct: 62 LYFAISACKLVVASVLFSELICLPFFIARGPPESRDKATANVTWLLINHRTGRHRI 117
>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
protein Y51A2D.19c protein.
Length = 1131
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 117 FTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEI 230
F S PE A + RLG+ L K NKE N+ I
Sbjct: 575 FANMSFPEAANLLFNRLGLLLLAIELKDEENKECNIAI 612
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.2
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = -2
Query: 445 IRLANNFAVIGARLFSFLSCLE*GKQGITAVTLEADAILQALIMMNSS----IRLSLISP 278
IR + GA+ + ++ L QG T AIL+A I IRLSL S
Sbjct: 2206 IRASRTGMEYGAQKLTKVNKLSTANQGRTDKMARNIAILKAKIEQAREKAYQIRLSLNSG 2265
Query: 277 QP-LCTMYTSSPLTDSPISTF 218
+ LC SP + SP++TF
Sbjct: 2266 ERGLCKRSYISPASPSPVNTF 2286
>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1c protein.
Length = 1131
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 117 FTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEI 230
F S PE A + RLG+ L K NKE N+ I
Sbjct: 575 FANMSFPEAANLLFNRLGLLLLAIELKDEENKECNIAI 612
>AF106575-8|AAC78169.1| 395|Caenorhabditis elegans Hypothetical
protein K04F1.10 protein.
Length = 395
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -1
Query: 269 LYYVHILTSY*FTNFN----VCFFVAEFLCSCSTEVNSEPCNNFFRNLRMRAPC 120
++Y ILTS N + +C F EF+ S S + + C F N+++ C
Sbjct: 4 VFYFFILTSVSNGNIDSTNPICSFTQEFITSESLKQFPKECETVFGNIQIDENC 57
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 7.2
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = -2
Query: 445 IRLANNFAVIGARLFSFLSCLE*GKQGITAVTLEADAILQALIMMNSS----IRLSLISP 278
IR + GA+ + ++ L QG T AIL+A I IRLSL S
Sbjct: 2206 IRASRTGMEYGAQKLTKVNKLSTANQGRTDKMARNIAILKAKIEQAREKAYQIRLSLNSG 2265
Query: 277 QP-LCTMYTSSPLTDSPISTF 218
+ LC SP + SP++TF
Sbjct: 2266 ERGLCKRSYISPASPSPVNTF 2286
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.1 bits (57), Expect = 7.2
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = +3
Query: 78 FNNPNSRMPNIKVFTGSSHPEIAKKIVARLGIDLGRATTKKFSNKETNVEIGESVRGED- 254
F NS++P + F SS PEI K + L + + R K N I ++ E+
Sbjct: 1227 FIEQNSKIPQLLKFAFSSSPEIVLKDKSMLALVVFREKQKLEIEINPNRTINVAITYENG 1286
Query: 255 VYIVQSGCGEINDNLMELFIMINACKIASASRVTAVIPCFPYSRQDK 395
V + G+ D ++ A+A + ++ F Y +DK
Sbjct: 1287 KSDVLNFVGDFLDGYRHFVVVQTNQASATAVMIDSLRQDFEYRGKDK 1333
>AF106577-12|AAC78182.1| 106|Caenorhabditis elegans Hypothetical
protein F46F5.6 protein.
Length = 106
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 18 VYQMNPDETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSHPEIA 146
V Q + D+T + ED + A +N N+ PN+ + S+ E A
Sbjct: 19 VVQGSTDDTDASEDTAESPAPDNANTVAPNVGAASTSTAKESA 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,311,583
Number of Sequences: 27780
Number of extensions: 200373
Number of successful extensions: 660
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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