Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_K23
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 31 0.33
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 29 1.0
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 29 1.0
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 29 1.0
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 29 1.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 27 4.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 27 4.1
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 27 4.1
Z82054-4|CAB04842.1| 453|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z82054-1|CAB04840.1| 453|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81109-18|CAB03255.1| 453|Caenorhabditis elegans Hypothetical p... 27 7.2
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 27 7.2
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 27 7.2
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 26 9.5
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.33
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -2
Query: 398 GCVFFAYLSACWVLDVMTGGANAGSQVFLIYEILNVFQLSKQSHKLN*DFIGR*LHFVSH 219
GC + C + + ++ Q+F I +LN F Q + N +F+ +F +
Sbjct: 91 GCDLLVPIDICIWVRIFQSFSSIFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCAF 150
Query: 218 TSIHDSAPQ*PR-LRLDTNSGP*AFLWDLSCTTFEHKD 108
SI + P + ++ D + L+C++FEHKD
Sbjct: 151 FSIFEPLPSVYKDIQRDGH--------QLNCSSFEHKD 180
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 277 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 314
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 323 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 360
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 277 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 314
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 323 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 360
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 247 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 284
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 244 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 281
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 250 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 287
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 237 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 274
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 125 TFEHKDGYRTDNKCAVWFVHDLMRSSLYSASTHTNIRS 12
T H + + D C +WF +L+ SL+ S H +RS
Sbjct: 227 TSPHPNFFYVDLICNIWFTIELLIRSLFCPSFHKFVRS 264
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 29.5 bits (63), Expect = 1.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 139 SQRNAQGPELVSSLKRGYCGAESC 210
S++N + PE++S++ GYC + C
Sbjct: 2 SEKNTENPEILSTVLAGYCQCQVC 25
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 279 RQLKDIKDLINE-EYLG-ARISSACHDVQYPAGAKICKENTAN 401
R D DL+ E E + AR+ CH+++ P K K+NT N
Sbjct: 1540 RMEDDCLDLMYEIEQMNEARLPQVCHEMRRPLAEKQQKQNTLN 1582
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 279 RQLKDIKDLINE-EYLG-ARISSACHDVQYPAGAKICKENTAN 401
R D DL+ E E + AR+ CH+++ P K K+NT N
Sbjct: 1540 RMEDDCLDLMYEIEQMNEARLPQVCHEMRRPLAEKQQKQNTLN 1582
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 92 CLFCSHPCAQMSCTTSPKGMLKDLSWCQVSSVATVGPSHVYS 217
C+ C P A++ C T K L D +C S P H +S
Sbjct: 9 CIGCQKP-AKLRCPTCIKMSLPDAYFCDQSCFKAFWPIHKFS 49
>Z82054-4|CAB04842.1| 453|Caenorhabditis elegans Hypothetical
protein R10D12.15 protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 152 LKDLSWCQVSSVATVGPSHVYSCGKQNVTIS 244
+K W + VGP H SCGK V ++
Sbjct: 345 IKAFKWFNGYFGSPVGPEHTLSCGKMPVKLN 375
>Z82054-1|CAB04840.1| 453|Caenorhabditis elegans Hypothetical
protein T26F2.1 protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 152 LKDLSWCQVSSVATVGPSHVYSCGKQNVTIS 244
+K W + VGP H SCGK V ++
Sbjct: 345 IKAFKWFNGYFGSPVGPEHTLSCGKMPVKLN 375
>Z81109-18|CAB03255.1| 453|Caenorhabditis elegans Hypothetical
protein R10D12.15 protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 152 LKDLSWCQVSSVATVGPSHVYSCGKQNVTIS 244
+K W + VGP H SCGK V ++
Sbjct: 345 IKAFKWFNGYFGSPVGPEHTLSCGKMPVKLN 375
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = -3
Query: 337 LMRAPRYSSFMRSLMSFSCLNSRTNLT-ETSLGDSYILFPTRVYMTRPHSSHA*DLTPTQ 161
L R + SF S + S +T +T + D+ IL + + RP T
Sbjct: 7 LPRPTQAQSFANSTIGGGANTSHLPVTLDTGINDNLILLALQERLMRPQQPTLTQSATTP 66
Query: 160 VLEHSFGTCRARHLSTRMATEQTTNVLYGLF 68
L H + +T + + TT ++ +F
Sbjct: 67 SLSHLAAATNSSTNATSLGSADTTRLIQQMF 97
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = -3
Query: 337 LMRAPRYSSFMRSLMSFSCLNSRTNLT-ETSLGDSYILFPTRVYMTRPHSSHA*DLTPTQ 161
L R + SF S + S +T +T + D+ IL + + RP T
Sbjct: 193 LPRPTQAQSFANSTIGGGANTSHLPVTLDTGINDNLILLALQERLMRPQQPTLTQSATTP 252
Query: 160 VLEHSFGTCRARHLSTRMATEQTTNVLYGLF 68
L H + +T + + TT ++ +F
Sbjct: 253 SLSHLAAATNSSTNATSLGSADTTRLIQQMF 283
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 223 ETKCNYLPMKSQLSLCDCLDN*KTLRIS*MRNTWEPALAPPVMTSNTQQALRYAKKTQPI 402
++KCN P+ S + C C + ++ S P S +R + + Q +
Sbjct: 76 KSKCNCYPIGSGMQRCKCSNEPQSSGCSCANKAQTSVCQPSCQKSCVDSCVRNSHQPQLL 135
Query: 403 WNNTC 417
+ TC
Sbjct: 136 CDKTC 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,506,372
Number of Sequences: 27780
Number of extensions: 215711
Number of successful extensions: 529
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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