Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_K19
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 131 3e-31
AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical ... 31 0.67
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 30 0.88
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF125459-9|AAD12845.2| 328|Caenorhabditis elegans Serpentine re... 28 4.7
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 27 6.2
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm rece... 27 6.2
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 27 8.2
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 27 8.2
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 27 8.2
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 131 bits (316), Expect = 3e-31
Identities = 68/169 (40%), Positives = 100/169 (59%)
Frame = +3
Query: 3 SAFYKALLANAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLL 182
SA+YK A+AAT ALRLH RI + +++ +F+ R +EDS HYL YS++F+ AP +
Sbjct: 77 SAYYKIFAASAATFALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSM 135
Query: 183 VLTPIFLFALLHAASYSLTILDTLGQNSMWVARLLISLVEFQSRNILRAAALAEIVLFPL 362
P+ ++A LHA ++ IL G S + +L Q++N L A +EI L PL
Sbjct: 136 AALPVTIYAALHACTFMTKILRETGHTSSIIPKLE-QFTAHQTQNALGIIACSEIFLVPL 194
Query: 363 VVFMALFGYCGLMSPFVYYYFVTWRYASRRNPYTRNTFRELRVLAEGIA 509
+V + G L+ PF YY F++ RYASRRNP TR F ++R + +A
Sbjct: 195 LVSLIFSGKGSLLLPFAYYRFLSLRYASRRNPSTRQAFAQMRGSLQNVA 243
>AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical
protein W06D4.2 protein.
Length = 290
Score = 30.7 bits (66), Expect = 0.67
Identities = 28/110 (25%), Positives = 51/110 (46%)
Frame = +3
Query: 99 FLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFALLHAASYSLTILDTLGQNSMWVA 278
F + F + YLF + +++AP + L P F+FALL T L +L + S ++A
Sbjct: 149 FSSTLFFGIFSGYLFGPRM-LSLAPTTIFLPP-FMFALLFDNGILPTPLVSLNRQSFFIA 206
Query: 279 RLLISLVEFQSRNILRAAALAEIVLFPLVVFMALFGYCGLMSPFVYYYFV 428
F S ++ LA IVL + ++LF + ++++ +
Sbjct: 207 --------FASISVFITTFLASIVLGSFSIVISLFNIVHVTGLYIHFQVI 248
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 30.3 bits (65), Expect = 0.88
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +3
Query: 114 FLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFALLHAASYSLTILDTLGQNSM--WVARLL 287
F+ + YLF F+N+ P L++ FA +A + + T+ V
Sbjct: 30 FIVSAMAYLFAMTNFLNL-PKLILENGGVAFAAAYAIVVGVLCMPTMVMEMSIGQVTGRA 88
Query: 288 ISLVEFQSRNILRAAALAEIVLFPLVVFMALFGYCGLMSPFVYYYFVTW 434
L + + R +++I LF +VV + + + F+YYYF T+
Sbjct: 89 PVLAFYHLFPVFRGIGVSQI-LFTMVVLACMTKFLSTLCLFLYYYFWTF 136
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 377 RHENDEREQNNLSERSRAQYVARLELHQRDQQSRHPHR 264
R+EN+ NN S R+ Y A+ + +Q QQ++HP R
Sbjct: 628 RYENNYH--NNSSNNQRSPYQAQNQQNQPTQQNQHPPR 663
>Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical
protein F19C6.1 protein.
Length = 642
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 414 YYYFVTWRYASRRNPYTRNTFRELRVLAEG 503
++ F+ W++ +R P ++TFR RVL +G
Sbjct: 184 FHRFLQWKWLEKR-PVDKHTFRLYRVLGKG 212
>AF125459-9|AAD12845.2| 328|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 22 protein.
Length = 328
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 123 DSAHYLFYSLIFMNVAPNLLVLTPIFLFALLHAASYSLTILDTLGQNSMWVARLLISLVE 302
DS F+S + + V+P +L+P F + +Y T L + +++++IS
Sbjct: 81 DSLVAAFFSRLVLRVSPLCTILSPFFFTPSIITKAYYATYNYNLAFKT--ISQIVISFNR 138
Query: 303 FQSRNI-LRAAALAEIVLFPLVVFMALF 383
+ +R A L + +L P+++ LF
Sbjct: 139 MTCVVLPIRHATLWKRILKPILIIQHLF 166
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = -1
Query: 412 TNGDISPQ*PNNAMKTTRGNRTISASAAARNMLRDWNSTREINSRATHIEFCPRVSSMVR 233
T GD +PQ P+ A + ++ S + D STRE + T E P ++
Sbjct: 466 TTGDQAPQIPSGAFQQIDLGKSRSLPRGHSRFILDKPSTREQSVEPTE-ELTPIQPIILP 524
Query: 232 E*EAACRSANKNIGVKTNKFGATFMKI 152
E R ++ G AT KI
Sbjct: 525 SREDEIRQSSMEAGTSQESVEATSQKI 551
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 371 ENDEREQNNLSERSRAQYVARLELHQRDQQSRHPHRI 261
+N R ++ S SR VA++E H+R S HR+
Sbjct: 582 QNSIRSASSCSSSSRLLNVAKIESHERIHSSTGGHRL 618
>AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm
receptor protein 208 protein.
Length = 347
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 117 LEDSAHYLFYSLIFMNVAPNLLVLTP---IFLFALLHAASYSLTILDTL 254
+++ + LFYSL+ + P LV TP ++ F+ L SLT + T+
Sbjct: 242 IQNLQNQLFYSLVAQTLIPLFLVHTPAFALYTFSFLRINIGSLTGITTI 290
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 321 ICCETGTPPERSTVAPPTSNSVQGYRVW*ESRKPRVEVQ 205
ICCE + + P T+ S +GYRV + P E++
Sbjct: 190 ICCEDPSFQRKHAPPPTTTKSPRGYRVKATTPLPEEELE 228
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 321 ICCETGTPPERSTVAPPTSNSVQGYRVW*ESRKPRVEVQ 205
ICCE + + P T+ S +GYRV + P E++
Sbjct: 191 ICCEDPSFQRKHAPPPTTTKSPRGYRVKATTPLPEEELE 229
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 27.1 bits (57), Expect = 8.2
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 144 YSLIFMNVAPNLLVLTPIFLFALL--HAASYSLTILDTLGQ-NSMWVARLLISLVEFQSR 314
+ L F+++ NLL+ P+F FA ++ Y + + + ++VA SL R
Sbjct: 12 FCLSFVSICLNLLIFIPVFRFAFFGKRSSIYLIAFFNIISDLQQLFVACFHSSLSIIFGR 71
Query: 315 NILRAAALAEIVLF 356
+L A + +F
Sbjct: 72 YVLSGARINSFSVF 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,439,282
Number of Sequences: 27780
Number of extensions: 209983
Number of successful extensions: 771
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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