Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K19
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    27   0.089
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.27 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.8  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   5.8  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.7  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 0.089
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 77  RNFNLQRVSCSIFLGGQRTLPVLLINLHERGTKF 178
           RNF + R SC + LG  + + V  INL   G  F
Sbjct: 167 RNFPMDRQSCPLILGSCKCIYVQSINLCMAGRLF 200


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 135 YLFYSLIFMNVAPNLLVLTPIF 200
           +LF  LIF++VA N+LV   I+
Sbjct: 30  FLFLILIFLSVAGNILVCVAIY 51


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 428  HEVIVHERGHQPAVT 384
            H++IVH   H P +T
Sbjct: 1359 HQLIVHAPPHSPQIT 1373


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +1

Query: 25  WLTRLHQR*DYTSESLLEKFQSPESFLLDFSWR 123
           W+  L     Y   S L  F  P   +L F WR
Sbjct: 237 WICELTNDAGYVVYSALGSFYIPMLVMLFFYWR 269


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 135 NVRCPPRKIEQETLWR 88
           N  CP  K+++  +WR
Sbjct: 100 NEMCPLEKLKERRIWR 115


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 371 ENDEREQNNLSERSRAQYVARLELHQRDQQ 282
           +ND   Q+N ++R +  + AR +  + + Q
Sbjct: 118 DNDYGNQDNRNDRRKKTFAAREDNDEEEAQ 147


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 51  RLHQRIPAREISISR 95
           RLH R+P R  ++ R
Sbjct: 108 RLHSRLPGRNFNLLR 122


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 343 SASAAARNMLRDWNSTREINSRATHIEFCPRVSS 242
           S S    N  RD+ +T  ++    H+   P VSS
Sbjct: 346 SQSHLISNENRDFQTTPTVSVEQPHLFLYPEVSS 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,428
Number of Sequences: 438
Number of extensions: 2766
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)