Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_K18
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical pr... 35 0.046
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 29 1.7
U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 5.3
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 5.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 5.3
AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical ... 28 5.3
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical p... 27 7.0
Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical p... 27 7.0
Z81057-4|CAB02918.1| 559|Caenorhabditis elegans Hypothetical pr... 27 9.2
U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical
protein C34F6.11 protein.
Length = 215
Score = 34.7 bits (76), Expect = 0.046
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 367 AVFADHASWEAIVHVILDATSLRIILGSTLFQLQQVPV 254
AV A H W A VH++ AT ++L + +F QVPV
Sbjct: 119 AVKALHIRWSAFVHLVFTATMTPLMLVAAIFATTQVPV 156
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 333 IASQLAWSANTACCSGNTRLVITGESAVMAH 425
+++Q AW + C SG+ TG+S ++ H
Sbjct: 132 VSNQAAWQRSRTCLSGSYNCPCTGDSVMITH 162
>U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical
protein F11C7.7 protein.
Length = 114
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 17 GMWHQWGVNRGRCGICGDRYDARLPRP 97
G W +W + CG CG + +RL P
Sbjct: 34 GDWSEWSICDSDCGFCGTQTRSRLCGP 60
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 347 GVVCEHCVLQWKYTAGNNWGVCSNGTQGLGCGN 445
G + E L W T+ NW CS G G N
Sbjct: 421 GQLAETIELSWVVTSATNWDRCSIGVSADGTAN 453
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 347 GVVCEHCVLQWKYTAGNNWGVCSNGTQGLGCGN 445
G + E L W T+ NW CS G G N
Sbjct: 421 GQLAETIELSWVVTSATNWDRCSIGVSADGTAN 453
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Frame = +3
Query: 141 TTTPAR*SPPQFI*RHHTSDTGSLNCAQIRKSTTRN-----ASTGTCCSWKRVEPSIILS 305
TTT A+ + + +T+ G A + + TR A+T T S + +
Sbjct: 223 TTTVAQTTTAPIVTTANTTTQGVTTTAGVTTTVTRAQNSTLAATTTAPSTNTTTQGVTTT 282
Query: 306 EVASSIT*TIASQLAWSANTACCSGNTRLVITGESAVMAHKGWDVEIRSSSERVP 470
V + T T A W+A T + T+ V+T ++ + SS +P
Sbjct: 283 -VGKTTTVTTAQNSTWAATTTASNTTTQPVVTTSTSTQGISTTTAQATPSSSVIP 336
>AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical
protein Y105E8B.2a protein.
Length = 686
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 400 VITSRVFPLQHAVFADHASWEAIVHVILDATSLRIILGSTLFQLQQVPVEAFLVVDF-RI 224
+I V + A+ +W+ ++H + D T++ + L + +L +P+E L +F I
Sbjct: 462 LIRRHVIEVAPAIAVIAYTWKNVMHTMEDLTAIGVHLNFEVNRLLSIPLEKSLQGNFENI 521
Query: 223 WAQFKLPVSE 194
K+ +SE
Sbjct: 522 CDAVKMRISE 531
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical protein
T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 158 VITTTVHLTTSHLGYWEFK-LCPDPKINDQECFDRYLLQLEEGGTKYYPK 304
+I+ H TT+ LG W+ K + P P+ Q C R++L+ G P+
Sbjct: 943 LISVIAHYTTNCLGMWDVKGVIPSPEF-QQIC--RHMLKFHNGLVGIMPR 989
>Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical
protein F13G3.5b protein.
Length = 282
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/86 (20%), Positives = 34/86 (39%)
Frame = +3
Query: 186 HHTSDTGSLNCAQIRKSTTRNASTGTCCSWKRVEPSIILSEVASSIT*TIASQLAWSANT 365
H + +G++N + + + +W PSII++E +T S +
Sbjct: 197 HRSFGSGAINMVMVAQGSCDGYVEYGIHAWDVAAPSIIVTEAGGVVTDPTGSPFDVMSRK 256
Query: 366 ACCSGNTRLVITGESAVMAHKGWDVE 443
C+G L SA + H ++ E
Sbjct: 257 VLCAGTAELG-RDLSACLTHVDFEPE 281
>Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical
protein F13G3.5a protein.
Length = 285
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/86 (20%), Positives = 34/86 (39%)
Frame = +3
Query: 186 HHTSDTGSLNCAQIRKSTTRNASTGTCCSWKRVEPSIILSEVASSIT*TIASQLAWSANT 365
H + +G++N + + + +W PSII++E +T S +
Sbjct: 200 HRSFGSGAINMVMVAQGSCDGYVEYGIHAWDVAAPSIIVTEAGGVVTDPTGSPFDVMSRK 259
Query: 366 ACCSGNTRLVITGESAVMAHKGWDVE 443
C+G L SA + H ++ E
Sbjct: 260 VLCAGTAELG-RDLSACLTHVDFEPE 284
>Z81057-4|CAB02918.1| 559|Caenorhabditis elegans Hypothetical
protein F10D11.5 protein.
Length = 559
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = -3
Query: 445 ISTSQPLCAITADSPVITSRVFPLQHAVFADHASWEAIVHVILDATSLRIILGSTLFQLQ 266
+STS+P + P + V VF DH SW +H ++ ++ I F
Sbjct: 90 VSTSEPKVTVPEPPPTHYAPV-----VVFIDHLSWPIFLHFVIVNRNMIITKVGRSFLTS 144
Query: 265 QVPVEAFLVVDFR-IW 221
+P + VD IW
Sbjct: 145 LMPGDQISGVDSTPIW 160
>U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical
protein F10D7.1 protein.
Length = 656
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 87 SRDLTSSVVSLEPGSSLPTTTP 152
S DL SSVVS+ P SS TTP
Sbjct: 496 STDLISSVVSVPPESSDAVTTP 517
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 110 HRAREVAGDERRNDPHRYRTFRG*RPTGATCRRS*H 3
HR G+ RR + HR T RG G T R H
Sbjct: 35 HRGETRRGETRRGETHRGETHRGETHRGETHRGETH 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,497,177
Number of Sequences: 27780
Number of extensions: 350558
Number of successful extensions: 1199
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -