Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K12
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    95   3e-20
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    37   0.008
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    29   2.1  
AF125961-2|AAD14739.1|  343|Caenorhabditis elegans Serpentine re...    27   8.3  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 94.7 bits (225), Expect = 3e-20
 Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
 Frame = +3

Query: 36  LGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL-PHVLRWYSHIAS 212
           + DVK+  GL   N  LAE+++ +G+  S  D ++F  +G  P AS  P+V RWY+++AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 213 YTPAERKTWSEGVSXXXXXXXXXXXXXXSNXXXXXXXXLFGSGDEEEQDAEAARVREERL 392
           YT AERKTW+                  +         LFGS D+EE+DAE A++ EERL
Sbjct: 62  YTDAERKTWA----------SAGGSAPAAAAADGDDFDLFGS-DDEEEDAEKAKIVEERL 110

Query: 393 KAYADQKSKK 422
            AYA++K+KK
Sbjct: 111 AAYAEKKAKK 120


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 36.7 bits (81), Expect = 0.008
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +3

Query: 327 LFGSGDEEEQDAEAARVREERLKAYADQKSKK 422
           LFGS DEEE D E  +V EERL AYA +K+ K
Sbjct: 140 LFGSEDEEE-DEEKKKVVEERLAAYAAKKATK 170


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 60  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 167
           G+N+LNQ L + +Y +G+  +++ I      GK+ A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 60  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 167
           G+N+LNQ L + +Y +G+  +++ +      GK+ A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


>AF125961-2|AAD14739.1|  343|Caenorhabditis elegans Serpentine
           receptor, class j protein15 protein.
          Length = 343

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 422 FLRLLVSICLKTFFTDSGCFCILLFLIT 339
           ++ L     + + F  +GC CI LF IT
Sbjct: 117 YITLFFPKLVASIFQSTGCICIFLFFIT 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,559,905
Number of Sequences: 27780
Number of extensions: 141361
Number of successful extensions: 446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)