Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_K09
(522 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 109 9e-25
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 30 0.87
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 30 0.87
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 30 0.87
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 30 0.87
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 30 0.87
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 30 0.87
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 30 0.87
Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 2.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 2.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 2.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 2.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 2.0
Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 109 bits (263), Expect = 9e-25
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +2
Query: 14 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKE-KKNF 190
RAFRNIPG+++ APGGHLGR IIWT+SAF +LD ++G+ S + KK +
Sbjct: 218 RAFRNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGW 277
Query: 191 NLPQPKMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNP 349
++P P MAN+D SR+++SEE+ K +RAP K V NPL + KLNP
Sbjct: 278 SVPLPIMANSDFSRIIRSEEVVKAIRAPKKNPVLPKVHRNPLKKRTLLYKLNP 330
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 340 AEP 348
EP
Sbjct: 92 PEP 94
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 340 AEP 348
EP
Sbjct: 92 PEP 94
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 23 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 82
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 11 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 69
Query: 340 AEP 348
EP
Sbjct: 70 PEP 72
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 23 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 82
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 11 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 69
Query: 340 AEP 348
EP
Sbjct: 70 PEP 72
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 340 AEP 348
EP
Sbjct: 92 PEP 94
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 340 AEP 348
EP
Sbjct: 92 PEP 94
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 348
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 339
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 340 AEP 348
EP
Sbjct: 92 PEP 94
>Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical
protein F48F7.5 protein.
Length = 293
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 169 IEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGD-VEAE 345
+E E+E + A ++G+ ++V + + ++ DTE E D+YE D VE E
Sbjct: 214 VEEEDEDEEADDDNGESTDLEGSDVDENREEKELIDESNDSDDTEFEEEDEYETDYVEDE 273
Query: 346 P 348
P
Sbjct: 274 P 274
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 31 PWHRDAQREQAEPPEAGTRRPSRQ 102
PW+ EPP G+RRPS+Q
Sbjct: 802 PWYSRDPIVNPEPPSVGSRRPSKQ 825
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 482 TAGCVSGSLMPRFSATASALRLFLPGPCXRGTGPFPFLQQPAGVQGSASTS 330
TA V+ PRFS +A R P P GT P P +P + G + S
Sbjct: 11 TALAVTSLAAPRFSVGETASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNAS 61
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSA-EVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 336
E E E E +PA E+ P+P+A E +P +A S + E ++
Sbjct: 515 EPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPP 574
Query: 337 EAEPCTPA--GC*RNGKGPVPRKQGPGRN 417
A +P+ R + P P +Q R+
Sbjct: 575 AARQSSPSPPPARRRPQSPSPERQRTSRH 603
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSA-EVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 336
E E E E +PA E+ P+P+A E +P +A S + E ++
Sbjct: 465 EPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPP 524
Query: 337 EAEPCTPA--GC*RNGKGPVPRKQGPGRN 417
A +P+ R + P P +Q R+
Sbjct: 525 AARQSSPSPPPARRRPQSPSPERQRTSRH 553
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSA-EVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 336
E E E E +PA E+ P+P+A E +P +A S + E ++
Sbjct: 515 EPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPP 574
Query: 337 EAEPCTPA--GC*RNGKGPVPRKQGPGRN 417
A +P+ R + P P +Q R+
Sbjct: 575 AARQSSPSPPPARRRPQSPSPERQRTSRH 603
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 EDTIEGEEELQPAPAEDGQHRPQPSA-EVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 336
E E E E +PA E+ P+P+A E +P +A S + E ++
Sbjct: 515 EPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPP 574
Query: 337 EAEPCTPA--GC*RNGKGPVPRKQGPGRN 417
A +P+ R + P P +Q R+
Sbjct: 575 AARQSSPSPPPARRRPQSPSPERQRTSRH 603
>Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical
protein F35G2.1b protein.
Length = 433
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 138 SLSKADLVQMMNLPRWPPGASFRR 67
+LS + LVQM+N+ +P A FRR
Sbjct: 66 ALSNSPLVQMLNIRNFPTVALFRR 89
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 138 SLSKADLVQMMNLPRWPPGASFRR 67
+LS + LVQM+N+ +P A FRR
Sbjct: 234 ALSNSPLVQMLNIRNFPTVALFRR 257
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +1
Query: 184 ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEPCTPAG 363
E PAPA+ + P P+ P A++ + A++ A P TPA
Sbjct: 678 EETPAPAQAAEETPAPAPAAEETPASAPAAEE----TPAPAPAAEEAPAPAPAAPETPAP 733
Query: 364 C*RNGKGPVP 393
P P
Sbjct: 734 AAEGAAAPAP 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,898,525
Number of Sequences: 27780
Number of extensions: 239549
Number of successful extensions: 1099
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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