Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K09
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              28   0.067
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.15 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.47 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   3.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   5.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 27.9 bits (59), Expect = 0.067
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 357 RGLLKERERAGSSXTRSRKE-QPEGARRRRETWHQTTGDTPG 479
           R +L+  ++A +  + +R E + +G  + + TW +  GDTPG
Sbjct: 680 RWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGDTPG 721


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 194 LPQPKMANTDLSRLLKSEEIRKVLRAPNKRV 286
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 92  HLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLP 199
           H   +  WT ++ +   P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 72  RRFSLFTLSISMPGMLRNARVR 7
           R++++  L I +  +LRN RVR
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVR 512


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 439 AEKRGIKLPETHPAVRPEKLT 501
           AEK   K+P T P   P+ LT
Sbjct: 305 AEKDPKKMPCTQPPSAPQNLT 325


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +2

Query: 236 LKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPVRPRVAEGTGKGRFLXNKVQ 409
           + S E  K+ +          + +NP+   KA+    PV  RV+ G  +  F    +Q
Sbjct: 1   MPSSEFSKISKVDRSTSPLPRKPVNPVQELKALFAEPPV--RVSNGGKEQDFRFEAIQ 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,219
Number of Sequences: 438
Number of extensions: 2999
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)