Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K08
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protei...    30   3.5  

>AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protein
           protein.
          Length = 930

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -1

Query: 235 LKWAISGTTGQLLRVTLVLLIFENY*GSV*LEMTEFIIVQLSVSTLNKRQIELSLIISAK 56
           L WAI+  T   L+V L  L+FEN        +T   + ++ ++ LN      +++++ K
Sbjct: 182 LAWAINYRTAIRLKVALSTLVFENLVSF--KTLTHISVGEMFMAKLNSAFRRSAILVTDK 239

Query: 55  FYQNRVE---CINLVK 17
             Q   E   CI L+K
Sbjct: 240 RVQTMNEFLTCIRLIK 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,909,423
Number of Sequences: 237096
Number of extensions: 1126112
Number of successful extensions: 1920
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)