Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_K06
(466 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 29 1.4
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 29 2.4
12_02_0921 - 24352178-24352324,24352840-24352890,24354188-243542... 28 4.3
12_02_0299 - 17051570-17052474,17053542-17053755 28 4.3
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393... 28 4.3
06_03_0267 + 18970578-18972464 28 4.3
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 4.3
03_05_0816 + 27928812-27930059,27931007-27931111,27931197-279312... 28 4.3
03_05_0220 + 22063411-22063468,22063535-22063545,22064478-220646... 28 4.3
08_01_0783 + 7585326-7585477,7586420-7586589,7586687-7586801,758... 27 5.6
06_03_0084 - 16386962-16387033,16387124-16387175,16387252-163873... 27 5.6
02_05_0814 - 31970558-31971126,31971242-31971413 27 5.6
02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328... 27 5.6
10_08_0725 + 20126821-20127528 27 7.4
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 27 7.4
06_01_0286 - 2094920-2097805 27 7.4
04_03_1017 + 21747044-21748051 27 7.4
12_01_0800 - 7331444-7331539,7331617-7331742,7331830-7331907,733... 27 9.8
08_01_0724 - 6426263-6426514,6428511-6428742,6429081-6429400,643... 27 9.8
06_03_1259 - 28800954-28802468 27 9.8
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 27 9.8
03_06_0474 - 34184002-34184660,34184755-34184887,34185071-341858... 27 9.8
02_05_0979 + 33268294-33269595 27 9.8
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 355 PQATPYDVTPMTS--KRQPLLRNSGPPLSPSQVSFEWSWSPK 236
PQ TP ++P S Q L +SGP S S V + W P+
Sbjct: 728 PQVTPATISPAPSLPSLQSLAPSSGPQTSGSCVPVDIEWPPR 769
>01_05_0655 -
23972488-23973152,23973193-23973241,23973883-23973940,
23974184-23974215,23975961-23976040,23976509-23977898
Length = 757
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -3
Query: 287 TAAVTLASIFRMVVVSEAHLCSAVIPVQEMSVRLVYLAA 171
T AV A + +VVV+ A L +A P E S L +LAA
Sbjct: 6 TRAVAAAVLVVVVVVAAAELVAAEPPPSERSALLAFLAA 44
>12_02_0921 -
24352178-24352324,24352840-24352890,24354188-24354253,
24354771-24354875
Length = 122
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 244 SPKHICVVPLYPFKRCR*GWYILLHSS 164
+P+H CV+ LY R + + I +HSS
Sbjct: 41 NPEHCCVIKLYKIGRLQVYYSIFIHSS 67
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -1
Query: 373 PAFPLN-PQATPYDVTPMTSKRQPLLRNSGPPLSPSQVSFEWSWSPKHICVVPLYP 209
PAFP PQ P P P PP P SF W + P + PL+P
Sbjct: 295 PAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPP----LAPLFP 346
>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
17839719-17839998,17840275-17840396,17840451-17840556,
17840814-17841020,17841130-17841255,17841719-17841817,
17842265-17842456,17842555-17843073
Length = 1171
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +3
Query: 315 FDVIGVTSYG-----VACGFKGNAGVYTRVEHYVPWIESVVW 425
FD++GVT Y V C +T ++H+V W ++W
Sbjct: 1054 FDILGVTMYTCVVWTVNCQLALYISYFTWIQHFVIWGSILIW 1095
>06_03_0267 + 18970578-18972464
Length = 628
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +3
Query: 153 RFSHEECSKIYQPHRHLLNGYNG----TTQMCFGDHDHSKDTCEGDSGGPLFLSNGCRFD 320
R H+ C+K Q + + G T C + S C+ GG + GC
Sbjct: 373 RCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCSKGAEGSTALCKAHGGGKRCSAEGCPKS 432
Query: 321 VIGVTSYGVACG 356
V G T + VA G
Sbjct: 433 VHGGTEFCVAHG 444
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 358 NPQATPYDVTPMT-SKRQPLLRNSGPPLSPS 269
NP ATP D TP + P L ++ PPL+ S
Sbjct: 46 NPNATPADTTPTSPPPASPPLPSATPPLAAS 76
>03_05_0816 +
27928812-27930059,27931007-27931111,27931197-27931262,
27931337-27931501,27931671-27931745,27931829-27931983,
27932234-27932369,27932454-27932523,27932602-27932729,
27932838-27932894,27933326-27933511,27934031-27934123,
27934488-27934573,27934668-27934734,27934873-27934939,
27935016-27935152,27935618-27935709,27935849-27935915,
27936058-27936078
Length = 1006
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Frame = -3
Query: 419 DALDPGYVMFNPSVYSRVSLEPAGNTV*RHTYDVETTTIAEEQW----TAAVTLASI--- 261
DA + G +F R+++ GNT+ ++ + A E+W A VT+A I
Sbjct: 346 DAGETGSYVFAQECLDRLAIAVGGNTILPVAAELLPSFFASEEWKRRHAALVTIAQIAEG 405
Query: 260 -FRMVV--VSEAHLCSAVIPVQE 201
R+++ + +AH SA++ E
Sbjct: 406 CARVMIKNLEQAHAASAILNFSE 428
>03_05_0220 +
22063411-22063468,22063535-22063545,22064478-22064609,
22064696-22065799,22065874-22066566,22066968-22067019,
22067861-22067916,22067917-22068063
Length = 750
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 171 CSKIYQPHRHLLNGYNGTTQMC 236
CSKIY P ++ G NGTT C
Sbjct: 78 CSKIYNPQLYVEKG-NGTTDWC 98
>08_01_0783 +
7585326-7585477,7586420-7586589,7586687-7586801,
7586887-7587055,7587185-7587319,7587409-7587728,
7587992-7588127,7588224-7588472,7588567-7588787,
7588906-7589164,7589264-7589971,7590095-7590424
Length = 987
Score = 27.5 bits (58), Expect = 5.6
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = +2
Query: 302 QWLSFRRHRCDVIRCCLRV 358
Q++S R +RC+++RC +++
Sbjct: 192 QYVSHREYRCEILRCLVKI 210
>06_03_0084 -
16386962-16387033,16387124-16387175,16387252-16387313,
16387509-16387543,16387637-16387679,16388610-16388692,
16388829-16388917,16390415-16390681,16391370-16391446,
16391546-16391677,16391802-16391870,16392464-16392529,
16392603-16392773,16392848-16392916,16393005-16393086,
16393175-16393219,16393535-16393659,16394271-16394525,
16396561-16396722
Length = 651
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 147 LNRFSHEECSKIYQPHRHLLNGYNGTTQMCFGDHDHSKDTCEGDSGGPLF 296
+N SH+ S P H+L+ Y + H K+TC + GPLF
Sbjct: 477 VNSGSHKFLSGSLIPE-HVLSPYRNVGNDPARNECHQKNTCNRNRSGPLF 525
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 391 STLVYTPAFPLNPQ-ATPYDVTPMTSKRQPLLRNSGPPLS 275
ST T +P P TPY TPMT+ P + P S
Sbjct: 158 STPTPTTPYPSTPMPTTPYPSTPMTTPTTPYTTPTSPACS 197
>02_05_0785 -
31730300-31730701,31730785-31730856,31730940-31732864,
31733000-31733150,31733944-31734009,31734247-31734645
Length = 1004
Score = 27.5 bits (58), Expect = 5.6
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Frame = +3
Query: 168 ECSKIYQPHRHLLNGYNG----TTQM---CFGDHDHSKDTCEGDSGGPLFLSNGCRFDV 323
E K+Y HR L G NG + +M CF SKD E G + +F V
Sbjct: 749 EAEKMYLKHRRSLTGQNGFNTASCEMMHGCFTGLQFSKDAAESKEGSEALSAAAKKFKV 807
>10_08_0725 + 20126821-20127528
Length = 235
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -1
Query: 319 SKRQPLLRNSGPPLSPSQVSFEW---SWSPKHICVVPLYPFKR 200
+K P+L ++G P++ SQV ++ +W + V+P P++R
Sbjct: 53 NKTVPVLLHAGRPVNESQVILQYIDEAWPDRPPAVLPSDPYER 95
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 394 CSTL-VYTPAFPLNPQATPYDVTPMTSKRQPLLRNSGPPLSPSQVSFE 254
CS L + AFPL TP D+ + + Q L++ ++ Q+S E
Sbjct: 2114 CSLLKMVFSAFPLEAATTPQDIKLLYQRVQDLIQKHLAAVTTPQISLE 2161
>06_01_0286 - 2094920-2097805
Length = 961
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 189 VGISCCTPHG*TCSDALYHVI 127
VG++CC +G TC++ H+I
Sbjct: 50 VGLNCCNWYGVTCNNRTGHII 70
>04_03_1017 + 21747044-21748051
Length = 335
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 379 YTPAFPLNPQATPYDVTPMTSKRQPL 302
YTP+ P P+A D TP T PL
Sbjct: 263 YTPSTPPPPRAASPDYTPSTPPSSPL 288
>12_01_0800 -
7331444-7331539,7331617-7331742,7331830-7331907,
7332515-7332747,7332832-7332871,7333016-7333070,
7333158-7333345,7333416-7333475,7333686-7333769,
7334817-7334903,7335178-7335246,7335354-7335410
Length = 390
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 425 PHDALDPGYVMFNPSVYSRVSLEPAGN 345
P+ P YVM+ P VY+ S+ P +
Sbjct: 76 PYGTPPPPYVMYPPGVYAHPSMPPGAH 102
>08_01_0724 -
6426263-6426514,6428511-6428742,6429081-6429400,
6433071-6433163,6433188-6433354,6433432-6433846
Length = 492
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 298 RNSGPPLSPSQVSFEWSWSPKHICVVPLYPFKRCR*GW 185
R+ P+ S V +EW+W K + YP + + W
Sbjct: 21 RSDAWPVPASMVKWEWNWMQKWFYINNPYPAEDDKANW 58
>06_03_1259 - 28800954-28802468
Length = 504
Score = 26.6 bits (56), Expect = 9.8
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 404 GYVMFNPSVYSRVSLEPA-GNTV*RHTYDVETTTIAEEQWTAAVTLASIFRMVVVSEAHL 228
GY++ P + SL A N + YD+E TT+ + +++ + VVV E
Sbjct: 257 GYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRLLVSTTPKSVVVVEDID 316
Query: 227 CS 222
CS
Sbjct: 317 CS 318
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 285 GPLFLSNGCRFDVIGVTSYGVACGFKGNAGVYTRVEHYVPW 407
G + ++ GCR + + +A G + + T VE Y+P+
Sbjct: 345 GAVLVTEGCRKIKLQYYGFKLASGARSESSPVTEVEPYIPF 385
>03_06_0474 -
34184002-34184660,34184755-34184887,34185071-34185886,
34186013-34186104,34186710-34186863
Length = 617
Score = 26.6 bits (56), Expect = 9.8
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = -1
Query: 448 YEWKKNYGHTTLSIQGT*CSTLVYTPAFPLNPQATP--YDVTPMTSKRQPLLRNSGPPLS 275
Y WK +G +T S G+ C + NP+ P + M++ L+R++ S
Sbjct: 147 YNWKSLHGSSTTSSYGSPCHPMFNLSKHSTNPKPPPPLKNSARMSNFSYQLVRSAE---S 203
Query: 274 PSQVSFEWSWSPKHICVVP 218
P + S H+ P
Sbjct: 204 PKNAKYSLSEKMSHLLKPP 222
>02_05_0979 + 33268294-33269595
Length = 433
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 286 PPLSPSQVSFEWSWSPKHICVVP 218
PP P Q F W W +H+ P
Sbjct: 80 PPFGPRQPFFAWQWQWQHLIPRP 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,464
Number of Sequences: 37544
Number of extensions: 328495
Number of successful extensions: 805
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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