Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K04
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.90 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 278 EISRKNRQTYKNLAVCVY 331
           E+S  N +TY N+  C Y
Sbjct: 100 EVSNNNFKTYSNVTTCSY 117


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 314 NFCRSVCFSGK 282
           N CRS CFS K
Sbjct: 83  NLCRSECFSTK 93


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 408 LLSICRILIYTNRSN*SICY 349
           +L  CRI++Y N +   I Y
Sbjct: 332 ILYFCRIMVYLNSAINPILY 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,499
Number of Sequences: 336
Number of extensions: 2568
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)