Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_K04
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67322-1|AAD00162.1|  468|Homo sapiens HBV associated factor pro...    29   9.3  
BC015219-1|AAH15219.2|  500|Homo sapiens RanBP-type and C3HC4-ty...    29   9.3  
AL121747-11|CAO03633.1|  340|Homo sapiens RanBP-type and C3HC4-t...    29   9.3  
AL121747-9|CAC28312.2|  510|Homo sapiens RanBP-type and C3HC4-ty...    29   9.3  
AL121747-3|CAC17516.1|  468|Homo sapiens RanBP-type and C3HC4-ty...    29   9.3  
AB107766-1|BAC75409.1|  468|Homo sapiens ubiquitin ligase protein.     29   9.3  

>U67322-1|AAD00162.1|  468|Homo sapiens HBV associated factor
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 339 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 365


>BC015219-1|AAH15219.2|  500|Homo sapiens RanBP-type and C3HC4-type
           zinc finger containing 1 protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 371 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 397


>AL121747-11|CAO03633.1|  340|Homo sapiens RanBP-type and C3HC4-type
           zinc finger containing 1 protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 211 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 237


>AL121747-9|CAC28312.2|  510|Homo sapiens RanBP-type and C3HC4-type
           zinc finger containing 1 protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 381 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 407


>AL121747-3|CAC17516.1|  468|Homo sapiens RanBP-type and C3HC4-type
           zinc finger containing 1 protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 339 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 365


>AB107766-1|BAC75409.1|  468|Homo sapiens ubiquitin ligase protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  FFATNINQIHIPACYFVRCIGFCSQFHE 180
           FF  ++N+   P C+ V C+  C   HE
Sbjct: 339 FFEDDVNEFTCPVCFHVNCL-LCKAIHE 365


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,137,808
Number of Sequences: 237096
Number of extensions: 1281372
Number of successful extensions: 5707
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5707
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)