Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J22
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 35 0.14
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 34 0.18
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 34 0.18
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 34 0.18
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 34 0.18
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 34 0.18
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 34 0.18
U15131-1|AAC50925.1| 1137|Homo sapiens p126 protein. 32 0.73
BC036655-1|AAH36655.1| 1137|Homo sapiens suppression of tumorige... 32 0.73
AJ400879-1|CAC35387.1| 1137|Homo sapiens suppression of tumorige... 32 0.73
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 29 6.8
BC065280-1|AAH65280.1| 713|Homo sapiens protein phosphatase 1, ... 29 9.0
AL606489-2|CAI16570.1| 713|Homo sapiens protein phosphatase 1, ... 29 9.0
AK222877-1|BAD96597.1| 713|Homo sapiens protein phosphatase 1, ... 29 9.0
AK027650-1|BAB55266.1| 713|Homo sapiens protein ( Homo sapiens ... 29 9.0
AK023772-1|BAB14673.1| 538|Homo sapiens protein ( Homo sapiens ... 29 9.0
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 29 9.0
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 29 9.0
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 171 PPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNFGS 350
PPP G PQ T+ GHP++ T G H +I + R T + + HLR G+
Sbjct: 622 PPPEHFGGLPQSTSGGHPQS-TSGGHPQSI---SGARPRSTSGDRPRSISGGHLRSISGA 677
Query: 351 RDR 359
+R
Sbjct: 678 PER 680
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 82 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 139
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 140 SRDERKKDDRSRKRD 154
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 82 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 139
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 140 SRDERKKDDRSRKRD 154
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 82 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 139
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 140 SRDERKKDDRSRKRD 154
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 83 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 140
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 141 SRDERKKDDRSRKRD 155
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 82 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 139
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 140 SRDERKKDDRSRKRD 154
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 165 IPPPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETLDSESETHNSTHLRLNF 344
+PPP +P +G + F H + D + + + ERE SR + S +S+ R N
Sbjct: 83 LPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSRRL--NHSPPQSSSRYRENR 140
Query: 345 GSRDRATPSRCDDRD 389
+R R RD
Sbjct: 141 SRDERKKDDRSRKRD 155
>U15131-1|AAC50925.1| 1137|Homo sapiens p126 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.73
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 168 PPPPRPLNGCPQFTTFGHPKNDTRGQHMA---TIVEREASASRETLDSESETHNSTHLRL 338
P P PL P PK D RG + E E ++S ++L S T N T +
Sbjct: 416 PAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYPSSPTENGTENQP 475
Query: 339 NFGSRDRATPSRCDD 383
FGS+ + +D
Sbjct: 476 KFGSKSTLEENAYED 490
>BC036655-1|AAH36655.1| 1137|Homo sapiens suppression of
tumorigenicity 5 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.73
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 168 PPPPRPLNGCPQFTTFGHPKNDTRGQHMA---TIVEREASASRETLDSESETHNSTHLRL 338
P P PL P PK D RG + E E ++S ++L S T N T +
Sbjct: 416 PAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYPSSPTENGTENQP 475
Query: 339 NFGSRDRATPSRCDD 383
FGS+ + +D
Sbjct: 476 KFGSKSTLEENAYED 490
>AJ400879-1|CAC35387.1| 1137|Homo sapiens suppression of
tumorigenicity 5 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.73
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 168 PPPPRPLNGCPQFTTFGHPKNDTRGQHMA---TIVEREASASRETLDSESETHNSTHLRL 338
P P PL P PK D RG + E E ++S ++L S T N T +
Sbjct: 416 PAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYPSSPTENGTENQP 475
Query: 339 NFGSRDRATPSRCDD 383
FGS+ + +D
Sbjct: 476 KFGSKSTLEENAYED 490
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 72 ENDDKARSIISSSTLTMHSACEGENRMDDYLIPPPPRPLNGCPQFTTF 215
END A S+ S T ++ A G +PPPP + G +++F
Sbjct: 352 ENDVAAMSLQSHLTPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSF 399
>BC065280-1|AAH65280.1| 713|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 15B protein.
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 63 VQSENDDKARSIISSSTLTMHSACEGENRMDDYLIPPP--PRPLNGCPQFTTFGHPK-ND 233
V +N D ++ TLT S+C E+ + P GCP +T G P+ +
Sbjct: 236 VSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHH 295
Query: 234 TRGQHMATIVEREASASRETLDSESETHN 320
R + + + + T D ++ H+
Sbjct: 296 LRMKRLEFLQQASKGQDLPTPDQDNGYHS 324
>AL606489-2|CAI16570.1| 713|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 15B protein.
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 63 VQSENDDKARSIISSSTLTMHSACEGENRMDDYLIPPP--PRPLNGCPQFTTFGHPK-ND 233
V +N D ++ TLT S+C E+ + P GCP +T G P+ +
Sbjct: 236 VSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHH 295
Query: 234 TRGQHMATIVEREASASRETLDSESETHN 320
R + + + + T D ++ H+
Sbjct: 296 LRMKRLEFLQQANKGQDLPTPDQDNGYHS 324
>AK222877-1|BAD96597.1| 713|Homo sapiens protein phosphatase 1,
regulatory subunit 15B variant protein.
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 63 VQSENDDKARSIISSSTLTMHSACEGENRMDDYLIPPP--PRPLNGCPQFTTFGHPK-ND 233
V +N D ++ TLT S+C E+ + P GCP +T G P+ +
Sbjct: 236 VSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHH 295
Query: 234 TRGQHMATIVEREASASRETLDSESETHN 320
R + + + + T D ++ H+
Sbjct: 296 LRMKRLEFLQQASKGQDLPTPDQDNGYHS 324
>AK027650-1|BAB55266.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ14744 fis, clone NT2RP3002770. ).
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 63 VQSENDDKARSIISSSTLTMHSACEGENRMDDYLIPPP--PRPLNGCPQFTTFGHPK-ND 233
V +N D ++ TLT S+C E+ + P GCP +T G P+ +
Sbjct: 236 VSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHH 295
Query: 234 TRGQHMATIVEREASASRETLDSESETHN 320
R + + + + T D ++ H+
Sbjct: 296 LRMKRLEFLQQASKGQDLPTPDQDNGYHS 324
>AK023772-1|BAB14673.1| 538|Homo sapiens protein ( Homo sapiens
cDNA FLJ13710 fis, clone PLACE2000373, weakly similar to
F-SPONDIN PRECURSOR. ).
Length = 538
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 411 CSYTCGLRLDHR--ICSE*LDLCYRSLTVNVYCC 316
CS TCGL + HR +C + RSLTV Y C
Sbjct: 208 CSKTCGLGMQHRQVLCRQ--VYANRSLTVQPYRC 239
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 168 PPPPRPLNG-CPQFTTFGHPKNDTRGQH 248
PP PR G PQ GHP + RG H
Sbjct: 787 PPGPRENQGPAPQGMIMGHPPQEMRGPH 814
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 168 PPPPRPLNG-CPQFTTFGHPKNDTRGQH 248
PP PR G PQ GHP + RG H
Sbjct: 787 PPGPRENQGPAPQGMIMGHPPQEMRGPH 814
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,446,587
Number of Sequences: 237096
Number of extensions: 1391595
Number of successful extensions: 4245
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4243
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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