Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J22
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical pr... 30 0.82
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 27 4.4
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 27 4.4
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 27 4.4
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 27 5.8
AC024839-8|AAF60825.1| 383|Caenorhabditis elegans Hypothetical ... 27 5.8
AC024839-7|AAF60827.1| 383|Caenorhabditis elegans Hypothetical ... 27 5.8
AC024799-10|AAK72319.1| 495|Caenorhabditis elegans Cytochrome p... 27 5.8
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical
protein F26F4.5 protein.
Length = 465
Score = 29.9 bits (64), Expect = 0.82
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 171 PPPRPLNGCPQFTTFGHPKNDTRGQHMATIVEREASASRETL 296
PPP P+ G P T+ K+ T +A++ AS+ E +
Sbjct: 109 PPPMPIEGLPPPTSQNQKKSRTSSSSLASVFRSRASSPIERM 150
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 126 SACEGENRMDDYLIPPPPRPLNGCPQF-TTF-GHPKNDTRGQHMATIVEREASASRETLD 299
S + E++ PP P PL P+F TT+ H + +T G+ + E + + E ++
Sbjct: 15 SPSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPME 74
Query: 300 SESE 311
+ E
Sbjct: 75 IDEE 78
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 126 SACEGENRMDDYLIPPPPRPLNGCPQF-TTF-GHPKNDTRGQHMATIVEREASASRETLD 299
S + E++ PP P PL P+F TT+ H + +T G+ + E + + E ++
Sbjct: 15 SPSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPME 74
Query: 300 SESE 311
+ E
Sbjct: 75 IDEE 78
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 126 SACEGENRMDDYLIPPPPRPLNGCPQF-TTF-GHPKNDTRGQHMATIVEREASASRETLD 299
S + E++ PP P PL P+F TT+ H + +T G+ + E + + E ++
Sbjct: 15 SPSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPME 74
Query: 300 SESE 311
+ E
Sbjct: 75 IDEE 78
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 34 AAAASPTRTAYSRKMMTKQDLLYLQVHSQCILPVREKTEWM 156
AAAAS T A ++M + + +Q+HS +L V E+T W+
Sbjct: 24 AAAASATGAAPPQQMQEEGNENPMQMHSNKVLQVMEQT-WI 63
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 34 AAAASPTRTAYSRKMMTKQDLLYLQVHSQCILPVREKTEWM 156
AAAAS T A ++M + + +Q+HS +L V E+T W+
Sbjct: 11 AAAASATGAAPPQQMQEEGNENPMQMHSNKVLQVMEQT-WI 50
>AC024839-8|AAF60825.1| 383|Caenorhabditis elegans Hypothetical
protein Y59E9AR.8 protein.
Length = 383
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 MDDYLIPPPPRPLNGCPQFTTFGHPKNDTR-GQHMATIVE 266
+ DY+ PPPP L + T GH + R G+ +T +E
Sbjct: 294 LPDYVAPPPPIALESVAKPTRIGHRHSIYRVGEDKSTELE 333
>AC024839-7|AAF60827.1| 383|Caenorhabditis elegans Hypothetical
protein Y59E9AR.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 MDDYLIPPPPRPLNGCPQFTTFGHPKNDTR-GQHMATIVE 266
+ DY+ PPPP L + T GH + R G+ +T +E
Sbjct: 294 LPDYVAPPPPIALESVAKPTRIGHRHSIYRVGEDKSTELE 333
>AC024799-10|AAK72319.1| 495|Caenorhabditis elegans Cytochrome p450
family protein33C11 protein.
Length = 495
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 109 LEDIIDLALSSFSDCTLCVSATLPPLTVL 23
L+D+ID+ SF+ LCV A +P + L
Sbjct: 196 LKDLIDIQEKSFASFKLCVQAFVPIMNKL 224
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 297 DSESETHNSTHLRLNFGSRDRATPSRCDDRDGAH 398
D E H ++H N+G+ D S+ DD +G +
Sbjct: 148 DKAQEKHGASHT--NYGNEDAGHKSKYDDNEGKY 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,247,142
Number of Sequences: 27780
Number of extensions: 221038
Number of successful extensions: 732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -