Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_J22
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   4.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   4.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   4.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   5.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 270 EASASRETLDSESETHNSTHLRLNFGSRDRATPSRCDD 383
           +++  RE  D+E    + T+       R  A PS  DD
Sbjct: 240 QSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDD 277



 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 360 LDLCYRSLTVNVYCCASPI 304
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 270 EASASRETLDSESETHNSTHLRLNFGSRDRATPSRCDD 383
           +++  RE  D+E    + T+       R  A PS  DD
Sbjct: 240 QSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDD 277



 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 360 LDLCYRSLTVNVYCCASPI 304
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 270 EASASRETLDSESETHNSTHLRLNFGSRDRATPSRCDD 383
           +++  RE  D+E    + T+       R  A PS  DD
Sbjct: 240 QSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDD 277



 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 360 LDLCYRSLTVNVYCCASPI 304
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 432 QLSVRLICSYTCGLRLD 382
           +L+ RL  +  CGLRL+
Sbjct: 131 RLNTRLQATLNCGLRLE 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,118
Number of Sequences: 438
Number of extensions: 2772
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)